RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 A0A1B0GVT2 93 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 NPIPB15A6NHN6 443 aaPredicted RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 ZNF185O15231 689 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 RAD51BO15315 384 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 LZTS3O60299 673 aaPredicted RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 TM7SF2O76062 418 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 C6P13671 934 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 PSMB4P28070 264 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 AKT2P31751 481 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 VIPR1P32241 457 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 HNF1BP35680 557 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 AFF3P51826 1226 aaKnown RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 WNT3AP56704 352 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 CLDN2P57739 230 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 RACK1P63244 317 aaKnown RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 OASLQ15646 514 aaKnown RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 AASDHQ4L235 1098 aaPredicted RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 DENND2CQ68D51 928 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 ITPRIPL1Q6GPH6 555 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 SLC23A3Q6PIS1 610 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 ARHGEF18Q6ZSZ5 1173 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 USP45Q70EL2 814 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 DPPA4Q7L190 304 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 RABEPKQ7Z6M1 372 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 TSPAN33Q86UF1 283 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 TAB3Q8N5C8 712 aaPredicted RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 IPMKQ8NFU5 416 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 MAIP1Q8WWC4 291 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 TADA1Q96BN2 335 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 RMDN1Q96DB5 314 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 IFT43Q96FT9 208 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 FCRL5Q96RD9 977 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 FRMD8P1Q9BZ68 369 aaPredicted RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 CAPN10Q9HC96 672 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 RXFP3Q9NSD7 469 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 TPX2Q9ULW0 747 aaKnown RBP14.4□□□□□ -0.1
USP3-205ENST00000557884 SLC6A14Q9UN76 642 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 ZNF148Q9UQR1 794 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 DMTF1Q9Y222 760 aa14.4□□□□□ -0.1
USP3-205ENST00000557884 A0A0J9YYE9 177 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 LNP1A1A4G5 178 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 CFAP69A5D8W1 941 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 C5orf60A6NFR6 353 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 PRR5-ARHGAP8B1AHC4 643 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 PRAMEF26H0Y7S4 382 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 H0Y8X5 98 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 OPHN1O60890 802 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 IFNB1P01574 187 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 TRBC1P01850 177 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 WNT1P04628 370 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 ELFN1P0C7U0 828 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 CYP2A6P11509 494 aaPredicted RBP14.39□□□□□ -0.11
USP3-205ENST00000557884 HNRNPA2B1P22626 353 aaKnown RBP14.39□□□□□ -0.11
USP3-205ENST00000557884 CD38P28907 300 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 NUDT1P36639 197 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 CDK18Q07002 472 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 GRIK2Q13002 908 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 STAT4Q14765 748 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 TEAD4Q15561 434 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 CNGA3Q16281 694 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 QPCTQ16769 361 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 KDELC1Q6UW63 502 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 LIPIQ6XZB0 460 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 KDM7AQ6ZMT4 941 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 PRUNE1Q86TP1 453 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 NDUFAF2Q8N183 169 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 RASGEF1CQ8N431 466 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 MCCC1Q96RQ3 725 aaPredicted RBP14.39□□□□□ -0.11
USP3-205ENST00000557884 TRIB3Q96RU7 358 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 NAPGQ99747 312 aaPredicted RBP14.39□□□□□ -0.11
USP3-205ENST00000557884 GORASP1Q9BQQ3 440 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 GTPBP2Q9BX10 602 aaKnown RBP14.39□□□□□ -0.11
USP3-205ENST00000557884 C1QTNF2Q9BXJ5 285 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 AP1M1Q9BXS5 423 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 ADGRE3Q9BY15 652 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 KCND1Q9NSA2 647 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 SPAG17Q6Q759 2223 aa14.39□□□□□ -0.11
USP3-205ENST00000557884 FAM186AA6NE01 2351 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 DMXL1Q9Y485 3027 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 A0A1W2PR77 199 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 PGRMC1O00264 195 aaKnown RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 GDF9O60383 454 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 ZNF189O75820 626 aaPredicted RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 HEXIM1O94992 359 aaKnown RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 PIRTP0C851 137 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 ETS1P14921 441 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 ENGP17813 658 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 LHCGRP22888 699 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 NFKBIAP25963 317 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 KCNJ1P48048 391 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 GRIA4P48058 902 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 C21orf59P57076 290 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 RPL26P61254 145 aaKnown RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 BNC1Q01954 994 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 OLIG2Q13516 323 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 ACOX1Q15067 660 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 SLC14A2Q15849 920 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 CCNG2Q16589 344 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 KCTD19Q17RG1 926 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms