RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CENPTQ96BT3 561 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ARSGQ96EG1 525 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 EDC3Q96F86 508 aaKnown RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 BICD1Q96G01 975 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HES6Q96HZ4 224 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 LINC00615Q96LM1 132 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 ZNF830Q96NB3 372 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 CAMK1GQ96NX5 476 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SIN3AQ96ST3 1273 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 PCED1AQ9H1Q7 454 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ABCG8Q9H221 673 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 MMP27Q9H306 513 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 TASP1Q9H6P5 420 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 KCNK12Q9HB15 430 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 Q9N2J8 555 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ANO10Q9NW15 660 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ASNSD1Q9NWL6 643 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 HAO2Q9NYQ3 351 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 NLKQ9UBE8 527 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CRNNQ9UBG3 495 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 IL19Q9UHD0 177 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 RABL2BQ9UNT1 228 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 ZNF148Q9UQR1 794 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 CHKBQ9Y259 395 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 R3HDM2Q9Y2K5 976 aaKnown RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 TRIM17Q9Y577 477 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SIRT4Q9Y6E7 314 aaPredicted RBP3.88□□□□□ -1.79
TDP1-217ENST00000557782 SLC30A1Q9Y6M5 507 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 SPATA31A1Q5TZJ5 1347 aa3.88□□□□□ -1.79
TDP1-217ENST00000557782 TCRBV7S3A2A0A539 114 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 OOEPA6NGQ2 149 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 CBY3A6NI87 242 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 KDM4EB2RXH2 506 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 RNASET2O00584 256 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 PRYO14603 147 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 MSTNO14793 375 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 KIF1CO43896 1103 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 DAB1O75553 588 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SCAF4O95104 1147 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 GDF11O95390 407 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 GCNT3O95395 438 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 BCL10O95999 233 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ENO1P06733 434 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 HMOX1P09601 288 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ZFXP17010 805 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 TYMPP19971 482 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ANXA7P20073 488 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 EDN2P20800 178 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 AGAP20933 346 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ACHEP22303 614 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SFPQP23246 707 aaKnown RBP eCLIP3.87□□□□□ -1.79
TDP1-217ENST00000557782 YWHAQP27348 245 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SOAT1P35610 550 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 GSK3AP49840 483 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 CYP2J2P51589 502 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SUOXP51687 545 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 LIMK1P53667 647 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SNU13P55769 128 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 UBASH3AP57075 661 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 YBEYP58557 167 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 STARD6P59095 220 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ASIC1P78348 528 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 JAG1P78504 1218 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 PSG6Q00889 435 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ECT2LQ008S8 904 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 RHAGQ02094 409 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 DMWDQ09019 674 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 RESTQ13127 1097 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 PPIGQ13427 754 aaKnown RBP eCLIP3.87□□□□□ -1.79
TDP1-217ENST00000557782 SSPNQ14714 243 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SF3B3Q15393 1217 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 MLANAQ16655 118 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ME3Q16798 604 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 TCTN1Q2MV58 587 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 TWISTNBQ3B726 338 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 CBWD6Q4V339 395 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 CBWD3Q5JTY5 395 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 C6orf141Q5SZD1 244 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 RARS2Q5T160 578 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 C6orf163Q5TEZ5 329 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 MOXD1Q6UVY6 613 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 CBLL1Q75N03 491 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 SPATA21Q7Z572 469 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 POLNQ7Z5Q5 900 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 WDR53Q7Z5U6 358 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 RABEPKQ7Z6M1 372 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 ADCK1Q86TW2 530 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 TBC1D26Q86UD7 250 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 DHX40Q8IX18 779 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 C16orf71Q8IYS4 520 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 ZCCHC9Q8N567 271 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 RTL3Q8N8U3 475 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 OR10S1Q8NGN2 331 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 BCAS4Q8TDM0 211 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 TEKT1Q969V4 418 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 PGBD1Q96JS3 809 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 PBKQ96KB5 322 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 RMDN2Q96LZ7 410 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 HARBI1Q96MB7 349 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 NUDCD1Q96RS6 583 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms