RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 TLE3Q04726 772 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 LBRQ14739 615 aaKnown RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 AGERQ15109 404 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 SMTNL2Q2TAL5 461 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 ENPP7Q6UWV6 458 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 GKN2Q86XP6 184 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 ARL10Q8N8L6 244 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 KYQ8NBH2 561 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 ATXN7L3BQ96GX2 97 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 NAF1Q96HR8 494 aaKnown RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 WDR92Q96MX6 357 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 ZNF599Q96NL3 588 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 BBC3Q96PG8 261 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-235ENST00000557740 EDEM3Q9BZQ6 932 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 SIRPGQ9P1W8 387 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 GULP1Q9UBP9 304 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 GPR34Q9UPC5 381 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 SATB2Q9UPW6 733 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 RAI2Q9Y5P3 530 aa14.72□□□□□ -0.05
SHMT2-235ENST00000557740 CFAP69A5D8W1 941 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 CACNB4O00305 520 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 RECQL5O94762 991 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 RBMS1P29558 406 aaKnown RBP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 KIAA1024LP59773 190 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 NSUN2Q08J23 767 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 RALGDSQ12967 914 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 SPIDRQ14159 915 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 DPYSL2Q16555 572 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 BROXQ5VW32 411 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 LVRNQ6Q4G3 990 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 TMCO3Q6UWJ1 677 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 DPPA4Q7L190 304 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 SDR16C5Q8N3Y7 309 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 KCNE4Q8WWG9 221 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 HSPH1Q92598 858 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 ECHDC3Q96DC8 303 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 PDXPQ96GD0 296 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 HIC2Q96JB3 615 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 CCDC3Q9BQI4 270 aa14.71□□□□□ -0.05
SHMT2-235ENST00000557740 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHMT2-235ENST00000557740 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-235ENST00000557740 TRAFD1O14545 582 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-235ENST00000557740 TNFP01375 233 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 KELP23276 732 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 IL1R2P27930 398 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 CXADRP78310 365 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 ACOX1Q15067 660 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 BOLA3Q53S33 107 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 FIGNQ5HY92 759 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 LIPIQ6XZB0 460 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 GPR155Q7Z3F1 870 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 BBS5Q8N3I7 341 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 ATPAF2Q8N5M1 289 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 PLA2G15Q8NCC3 412 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 OR56A4Q8NGH8 313 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 NSMCE1Q8WV22 266 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 CCDC74AQ96AQ1 378 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 ISCUQ9H1K1 167 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 WDR26Q9H7D7 661 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 ASCL3Q9NQ33 180 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 ENTPD2Q9Y5L3 495 aa14.7□□□□□ -0.06
SHMT2-235ENST00000557740 TEX51A0A1B0GUA7 166 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 SOCS5O75159 536 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 CPP00450 1065 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 NFKBIAP25963 317 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 SERPINB6P35237 376 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 UCNP55089 124 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 SLC10A7Q0GE19 358 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 PIGHQ14442 188 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-235ENST00000557740 IQCB1Q15051 598 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 FOXR1Q6PIV2 292 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 IGF2-ASQ6U949 168 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 POLNQ7Z5Q5 900 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 TP53INP2Q8IXH6 220 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 PDCD6IPQ8WUM4 868 aaKnown RBP14.69□□□□□ -0.06
SHMT2-235ENST00000557740 CSPG4P5Q96PW8 444 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 FGF22Q9HCT0 170 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 B4GALT6Q9UBX8 382 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 BZW2Q9Y6E2 419 aaKnown RBP14.69□□□□□ -0.06
SHMT2-235ENST00000557740 DGKBQ9Y6T7 804 aa14.69□□□□□ -0.06
SHMT2-235ENST00000557740 LOC400499M0QZD8 3231 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 CCDC187A0A096LP49 1063 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 A0A1W2PQ67 120 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 A0A1W2PQJ5 194 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 A8MX80 341 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 ATXN7O15265 892 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-235ENST00000557740 RARAP10276 462 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 TCF4P15884 667 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 AMPD1P23109 780 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 PDX1P52945 283 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 TMPRSS3P57727 454 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 KRT81Q14533 505 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 NR1I3Q14994 352 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 NYAP1Q6ZVC0 841 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 TAF8Q7Z7C8 310 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 ARL14Q8N4G2 192 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 OR6C4Q8NGE1 309 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms