RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 LRRC45Q96CN5 670 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 MYOCQ99972 504 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 SEMA3CQ99985 751 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 MGME1Q9BQP7 344 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 LACRTQ9GZZ8 138 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 GOLPH3Q9H4A6 298 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 FSCN3Q9NQT6 498 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 KCTD5Q9NXV2 234 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 PHTF1Q9UMS5 762 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 SNX11Q9Y5W9 270 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 HS3ST3A1Q9Y663 406 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 DUSP10Q9Y6W6 482 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 FAM186AA6NE01 2351 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 PLXND1Q9Y4D7 1925 aa8.39□□□□□ -1.07
PSEN1-223ENST00000557511 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 GPR179Q6PRD1 2367 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 hCG_1818297A0A087WSY0 165 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 TSPAN11A1L157 253 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 IGLON5A6NGN9 336 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 H7C0C1 242 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 TOR1BO14657 336 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 MMP20O60882 483 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 JCHAINP01591 159 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ITGAVP06756 1048 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ELFN1P0C7U0 828 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ZNF883P0CG24 379 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 THEGLP0DJG4 465 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 RABIFP47224 123 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 RGRP47804 291 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ATP5OP48047 213 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 NOVA1P51513 510 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 THOP1P52888 689 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 TMEM52BQ4KMG9 183 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 LRRC73Q5JTD7 316 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 SEL1L2Q5TEA6 688 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 SEL1L3Q68CR1 1132 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 MRPL14Q6P1L8 145 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ERMP1Q7Z2K6 904 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 TEX26Q8N6G2 289 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ATL2Q8NHH9 583 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 IFT43Q96FT9 208 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 LENG8Q96PV6 779 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 LGMNQ99538 433 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ELF4Q99607 663 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 WRAP53Q9BUR4 548 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 HEMGNQ9BXL5 484 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ADGRE3Q9BY15 652 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 OSBPL8Q9BZF1 889 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 NOD2Q9HC29 1040 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 PCDH12Q9NPG4 1184 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 TM7SF3Q9NS93 570 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 RXFP3Q9NSD7 469 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 DNAAF2Q9NVR5 837 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 EFR3BQ9Y2G0 817 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 RAI2Q9Y5P3 530 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 EML5Q05BV3 1969 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 SPAG17Q6Q759 2223 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 ABCA7Q8IZY2 2146 aa8.38□□□□□ -1.07
PSEN1-223ENST00000557511 EP300Q09472 2414 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-223ENST00000557511 OTOGLQ3ZCN5 2332 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 GRID2IPA4D2P6 1211 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 H3BM21 787 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 APOC4-APOC2K7ER74 178 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 KCNK1O00180 336 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 AREL1O15033 823 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 FLRT2O43155 660 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ZSCAN12O43309 604 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 HTRA2O43464 458 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 FTCDO95954 541 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 PEX11BO96011 259 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 APOC2P02655 101 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 C6P13671 934 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 CSRP1P21291 193 aaKnown RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 HTR1BP28222 390 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 VIPR1P32241 457 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 CTSKP43235 329 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 LIG3P49916 1009 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 NXPH1P58417 271 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 IFI35P80217 286 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 FOXK2Q01167 660 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 XRCC4Q13426 336 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 PRPSAP1Q14558 356 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 LRRC14Q15048 493 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ACOX1Q15067 660 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 LLGL1Q15334 1064 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 PPM1JQ5JR12 505 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 LAYNQ6UX15 382 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms