RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 NRG1Q02297 640 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-221ENST00000557293 CLPPQ16740 277 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-221ENST00000557293 UGP2Q16851 508 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 TRIM65Q6PJ69 517 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 TIPARPQ7Z3E1 657 aaKnown RBP12.62□□□□□ -0.39
PSEN1-221ENST00000557293 ZSWIM9Q86XI8 627 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 ZDHHC17Q8IUH5 632 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 BMPERQ8N8U9 685 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 OR56A4Q8NGH8 313 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 HCAR2Q8TDS4 363 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 DDA1Q9BW61 102 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 PCDH12Q9NPG4 1184 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 TMEM248Q9NWD8 314 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 LHX3Q9UBR4 397 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.62□□□□□ -0.39
PSEN1-221ENST00000557293 ST14Q9Y5Y6 855 aa12.62□□□□□ -0.39
PSEN1-221ENST00000557293 ITPR2Q14571 2701 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 PRR19A6NJB7 356 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 FOXN3O00409 490 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 PSMA7O14818 248 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 PPM1DO15297 605 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 CAPN5O15484 640 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 PCCBP05166 539 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 RHOQP17081 205 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 ADRA1BP35368 520 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 ETFBP38117 255 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 UQCRFS1P47985 274 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 MAPKAPK2P49137 400 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 SUOXP51687 545 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 GEMIN4P57678 1058 aaKnown RBP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 CDC20Q12834 499 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 KLRB1Q12918 225 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 TRA2AQ13595 282 aaKnown RBP eCLIP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 CYTH1Q15438 398 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 C2CD6Q53TS8 623 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 NKAIN2Q5VXU1 208 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 SLC47A2Q86VL8 602 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 ATL2Q8NHH9 583 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 APOBEC4Q8WW27 367 aaKnown RBP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 PATE1Q8WXA2 126 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 CFAP57Q96MR6 1250 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 RETREG1Q9H6L5 497 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 SIX2Q9NPC8 291 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 TMEM51Q9NW97 253 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 SLC39A1Q9NY26 324 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 AKAP7Q9P0M2 348 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-221ENST00000557293 TMEM9Q9P0T7 183 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 OR12D3Q9UGF7 316 aa12.61□□□□□ -0.39
PSEN1-221ENST00000557293 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 FAM170AA1A519 330 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 B4E171 279 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 BUB1O43683 1085 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PIGNO95427 931 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PRKCGP05129 697 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 KRT7P08729 469 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PNMA6AP0CW24 399 aaPredicted RBP12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PRKAR1AP10644 381 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 MPSTP25325 297 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 CSF2RBP32927 897 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 KRT9P35527 623 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 MMP12P39900 470 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 TSPAN7P41732 249 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 SNX16P57768 344 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PTK2Q05397 1052 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 RAD51Q06609 339 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 RALGDSQ12967 914 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 DEFB109BQ30KR1 87 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 LACTB2Q53H82 288 aaPredicted RBP12.6□□□□□ -0.39
PSEN1-221ENST00000557293 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
PSEN1-221ENST00000557293 ATP1A1-AS1Q5TC04 95 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 ANKS6Q68DC2 871 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 DPY19L2P1Q6NXN4 242 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 UNC5BQ8IZJ1 945 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 AGBL5Q8NDL9 886 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
PSEN1-221ENST00000557293 NELFBQ8WX92 580 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 SMARCE1Q969G3 411 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 C18orf8Q96DM3 657 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 SYNCQ9H7C4 482 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 CYP4F12Q9HCS2 524 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 MAN1B1Q9UKM7 699 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 TP53TG5Q9Y2B4 290 aa12.6□□□□□ -0.39
PSEN1-221ENST00000557293 IGHV1OR21-1A0A087WYE8 117 aa12.59□□□□□ -0.39
PSEN1-221ENST00000557293 CFAP69A5D8W1 941 aa12.59□□□□□ -0.39
PSEN1-221ENST00000557293 ENO4A6NNW6 628 aa12.59□□□□□ -0.39
PSEN1-221ENST00000557293 RECQL5O94762 991 aaPredicted RBP12.59□□□□□ -0.39
PSEN1-221ENST00000557293 LRIG2O94898 1065 aa12.59□□□□□ -0.39
PSEN1-221ENST00000557293 SMC2O95347 1197 aa12.59□□□□□ -0.39
PSEN1-221ENST00000557293 ECEL1O95672 775 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms