RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TOP6BLQ8N6T0 577 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 ANKFN1Q8N957 763 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 FAM45AQ8TCE6 357 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 MIPOL1Q8TD10 442 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 FCRL5Q96RD9 977 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 SLC39A8Q9C0K1 460 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 GSTO2Q9H4Y5 243 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 TREX1Q9NSU2 369 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 RBM22Q9NW64 420 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRP54-213ENST00000556994 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
SRP54-213ENST00000556994 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.44□□□□□ -0.58
SRP54-213ENST00000556994 MAP10Q9P2G4 905 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 DSEQ9UL01 958 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 IPPQ9Y573 584 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 SQORQ9Y6N5 450 aa11.44□□□□□ -0.58
SRP54-213ENST00000556994 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 TTC24A2A3L6 582 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 LRRC14BA6NHZ5 514 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 PSMD3O43242 534 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 XPOTO43592 962 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 CACNG3O60359 315 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ANXA9O76027 345 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 LTA4HP09960 611 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 HSPA8P11142 646 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 BMP2P12643 396 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 KCNE1P15382 129 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 OXTRP30559 389 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 AFF1P51825 1210 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 TUBA4AP68366 448 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ZNF792Q3KQV3 632 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 UBXN11Q5T124 520 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 C8orf82Q6P1X6 216 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 ELMSAN1Q6PJG2 1045 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 DCLRE1AQ6PJP8 1040 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 BHLHA9Q7RTU4 235 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ZBTB46Q86UZ6 589 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 PIM3Q86V86 326 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ERO1BQ86YB8 467 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ARHGAP12Q8IWW6 846 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 OFCC1Q8IZS5 231 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 AFAP1L2Q8N4X5 818 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 FNDC8Q8TC99 324 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 CYGBQ8WWM9 190 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 DUS3LQ96G46 650 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 FBXL20Q96IG2 436 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 FAR2Q96K12 515 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 MRGPRX2Q96LB1 330 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 SENP8Q96LD8 212 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 FAM210AQ96ND0 272 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 AKTIPQ9H8T0 292 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 CNGB3Q9NQW8 809 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ANKRD12Q6UB98 2062 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 TANC1Q9C0D5 1861 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 A0A0J9YYE9 177 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 FAM155AB1AL88 458 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 PTGESO14684 152 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 GABRDO14764 452 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 MAFKO60675 156 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ATE1O95260 518 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 BMP10O95393 424 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 PAMP19021 973 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 GPX3P22352 226 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 CCNCP24863 283 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 DNAJB1P25685 340 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ADRA1AP35348 466 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 IREB2P48200 963 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 POLD2P49005 469 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 APLP1P51693 650 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 KPNA2P52292 529 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 PSMD5Q16401 504 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 GEN1Q17RS7 908 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 IFNEQ86WN2 208 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 SMG8Q8ND04 991 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 OR6J1Q8NGC5 347 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 OR52K2Q8NGK3 314 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 HM13Q8TCT9 377 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 PGAP3Q96FM1 320 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 TSGA13Q96PP4 275 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 ADI1Q9BV57 179 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 OSBPL6Q9BZF3 934 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 SOX17Q9H6I2 414 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 CCM2LQ9NUG4 571 aaPredicted RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 NUDT5Q9UKK9 219 aa11.43□□□□□ -0.58
SRP54-213ENST00000556994 PDCD11Q14690 1871 aaKnown RBP11.43□□□□□ -0.58
SRP54-213ENST00000556994 A0A087WXM4 84 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 DHRS12A0PJE2 317 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 OR51F1A6NGY5 319 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 HHLA1C9JL84 531 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ZSCAN9O15535 394 aaPredicted RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 SIX3O95343 332 aaPredicted RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 SLC4A1P02730 911 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 MTHFD1P11586 935 aaKnown RBP11.42□□□□□ -0.58
SRP54-213ENST00000556994 DNAJB2P25686 324 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 CDKN2DP55273 166 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 FOXA1P55317 472 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 STX1BP61266 288 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 ESRRGP62508 458 aa11.42□□□□□ -0.58
SRP54-213ENST00000556994 SH3BP2P78314 561 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms