RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ZBTB17Q13105 803 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 LRRC14Q15048 493 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 GCNT7Q6ZNI0 430 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 Q6ZSR6 202 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 B4GALNT4Q76KP1 1039 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 DPPA4Q7L190 304 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 ERMP1Q7Z2K6 904 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 ZC3H18Q86VM9 953 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 SPATS2Q86XZ4 545 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 TTC13Q8NBP0 860 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 OR13H1Q8NG92 308 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PIH1D2Q8WWB5 315 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 TEKT5Q96M29 485 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 VAT1Q99536 393 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 MYOCQ99972 504 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 FERMT1Q9BQL6 677 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 TDRD1Q9BXT4 1180 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 SLC32A1Q9H598 525 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PCDH9Q9HC56 1237 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 SEPT10Q9P0V9 454 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PACSIN2Q9UNF0 486 aaPredicted RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 RPL26L1Q9UNX3 145 aaKnown RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 CA5BQ9Y2D0 317 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PPP2R2CQ9Y2T4 447 aa10.74□□□□□ -0.69
LINC00239-201ENST00000556973 PTPRZ1P23471 2315 aaPredicted RBP10.74□□□□□ -0.69
LINC00239-201ENST00000556973 LAMA1P25391 3075 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 A0A1B0GTQ1 180 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 GOLGA6L9A6NEM1 432 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 A8MX80 341 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 H7C0C1 242 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 YKT6O15498 198 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 PCDHGA12O60330 932 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 PRKCGP05129 697 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 MMP2P08253 660 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 ELFN1P0C7U0 828 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CYP2A6P11509 494 aaPredicted RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CEACAM1P13688 526 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 PTPN3P26045 913 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 VIPR1P32241 457 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CD86P42081 329 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 ATP5OP48047 213 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CCT8P50990 548 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 EPHB1P54762 984 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 YPEL5P62699 121 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 SKOR1P84550 965 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 OTUD4Q01804 1114 aaKnown RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 SEMG2Q02383 582 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 WASHC5Q12768 1159 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 RALGDSQ12967 914 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 ZNF211Q13398 564 aaPredicted RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 IHHQ14623 411 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 NOMO1Q15155 1222 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 MEI1Q5TIA1 1274 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 AADACL2Q6P093 401 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 KYAT3Q6YP21 454 aaKnown RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 USP45Q70EL2 814 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 PID1Q7Z2X4 250 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 PIP4P1Q86T03 277 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CBARPQ8N350 705 aaPredicted RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 TP53I13Q8NBR0 393 aaPredicted RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 HTR3CQ8WXA8 447 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 HAUS1Q96CS2 278 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 IFT43Q96FT9 208 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 IMP4Q96G21 291 aaKnown RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 ALS2CR12Q96Q35 445 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 ADGRE3Q9BY15 652 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CEP41Q9BYV8 373 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 SLC25A51Q9H1U9 297 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 GLOD4Q9HC38 313 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 KCTD5Q9NXV2 234 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 B4GALT6Q9UBX8 382 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 TRHDEQ9UKU6 1024 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CHKBQ9Y259 395 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 FNDC3AQ9Y2H6 1198 aaKnown RBP10.73□□□□□ -0.69
LINC00239-201ENST00000556973 COQ6Q9Y2Z9 468 aa10.73□□□□□ -0.69
LINC00239-201ENST00000556973 CACNA1EQ15878 2313 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 DNAH14Q0VDD8 3507 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 SPTY2D1-AS1A0A0U1RR47 76 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 ANKRD66B4E2M5 251 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 PSMD11O00231 422 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 FLRT2O43155 660 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 SH3BP5O60239 455 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 ZNF189O75820 626 aaPredicted RBP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 KCNK5O95279 499 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 PRLP01236 227 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 HNF1BP35680 557 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 EIF3EP60228 445 aaKnown RBP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 PFN3P60673 137 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 ARHGEF7Q14155 803 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 PTK2BQ14289 1009 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 SHBQ15464 509 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 SLC14A2Q15849 920 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 WSCD2Q2TBF2 565 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 PPM1JQ5JR12 505 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 PRAMEF14Q5SWL7 426 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 RAVER1Q8IY67 606 aaKnown RBP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 TRIM58Q8NG06 486 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 ACTL9Q8TC94 416 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms