RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CERS2Q96G23 380 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 FCRL3Q96P31 734 aaPredicted RBP23.86■■□□□ 1.41
SIX4-203ENST00000556952 OSBPL1AQ9BXW6 950 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 TMBIM4Q9HC24 238 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.86■■□□□ 1.41
SIX4-203ENST00000556952 HACD3Q9P035 362 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 VPS18Q9P253 973 aa23.86■■□□□ 1.41
SIX4-203ENST00000556952 EDDM13A0A1B0GTR0 161 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 MROH6A6NGR9 719 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 FAM159BA6NKW6 160 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 GOLGA8KD6RF30 607 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 NPC1O15118 1278 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 PAMP19021 973 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 NMBRP28336 390 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 GKP32189 559 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 TNFRSF4P43489 277 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 NAB1Q13506 487 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 QPCTQ16769 361 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 HNRNPA1L2Q32P51 320 aaKnown RBP23.85■■□□□ 1.41
SIX4-203ENST00000556952 TRMT10BQ6PF06 316 aaKnown RBP23.85■■□□□ 1.41
SIX4-203ENST00000556952 PIH1D2Q8WWB5 315 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 CDKL2Q92772 493 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 PTPRN2Q92932 1015 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 SRPK1Q96SB4 655 aaKnown RBP23.85■■□□□ 1.41
SIX4-203ENST00000556952 TMEM245Q9H330 911 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 SUV39H2Q9H5I1 410 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 TREX1Q9NSU2 369 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 THAP10Q9P2Z0 257 aaPredicted RBP23.85■■□□□ 1.41
SIX4-203ENST00000556952 RIMKLBQ9ULI2 386 aa23.85■■□□□ 1.41
SIX4-203ENST00000556952 PRR33A8MZF0 331 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 CRTAMO95727 393 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 GALK1P51570 392 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 TSTD2Q5T7W7 516 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 CES3Q6UWW8 571 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 SFTPA1Q8IWL2 248 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 CHST14Q8NCH0 376 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 ZBTB9Q96C00 473 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 PGM2Q96G03 612 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 MSANTD3Q96H12 275 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 SHDQ96IW2 340 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 LRFN3Q9BTN0 628 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 IL36AQ9UHA7 158 aa23.84■■□□□ 1.41
SIX4-203ENST00000556952 MTF2Q9Y483 593 aaPredicted RBP23.84■■□□□ 1.41
SIX4-203ENST00000556952 KANSL1LA0AUZ9 987 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 TLDC2A0PJX2 215 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 SMIM23A6NLE4 172 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 POC1B-GALNT4F8VUJ3 575 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 STK25O00506 426 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 LDB2O43679 373 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 HNRNPLP14866 589 aaKnown RBP eCLIP23.83■■□□□ 1.41
SIX4-203ENST00000556952 GLULP15104 373 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 TARSP26639 723 aaKnown RBP23.83■■□□□ 1.41
SIX4-203ENST00000556952 SLCO1A2P46721 670 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 MGAT5Q09328 741 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 EFTUD2Q15029 972 aaKnown RBP eCLIP23.83■■□□□ 1.41
SIX4-203ENST00000556952 KIAA0930Q6ICG6 404 aaPredicted RBP23.83■■□□□ 1.41
SIX4-203ENST00000556952 SERPINA13PQ6UXR4 307 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 GDPD4Q6W3E5 623 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 LRRC6Q86X45 466 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 PAF1Q8N7H5 531 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 ZNF778Q96MU6 729 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 PAFAH2Q99487 392 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 DHRS4Q9BTZ2 278 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 STMN4Q9H169 189 aaPredicted RBP23.83■■□□□ 1.41
SIX4-203ENST00000556952 TRABDQ9H4I3 376 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 LTB4R2Q9NPC1 389 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 PSMC3IPQ9P2W1 217 aaPredicted RBP23.83■■□□□ 1.41
SIX4-203ENST00000556952 LGALS13Q9UHV8 139 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 WASF2Q9Y6W5 498 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 ZNF318Q5VUA4 2279 aa23.83■■□□□ 1.41
SIX4-203ENST00000556952 PI15O43692 258 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 GCAP28676 217 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 PDE1BQ01064 536 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 TAF1AQ15573 450 aaPredicted RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 AGBL2Q5U5Z8 902 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 PDPK2PQ6A1A2 396 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 GLT6D1Q7Z4J2 308 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 NDUFAF2Q8N183 169 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 FBXL6Q8N531 539 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 FAM3CQ92520 227 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 MAGEE1Q9HCI5 957 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 PPANQ9NQ55 473 aaKnown RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 EURLQ9NYK6 297 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 PHTF1Q9UMS5 762 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 A0A0J9YYE9 177 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 RGS16O15492 202 aaPredicted RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 TRBC1P01850 177 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 PRKCGP05129 697 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 UGT2B4P06133 528 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 MSH2P43246 934 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 UBXN2BQ14CS0 331 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 ESRP1Q6NXG1 681 aaKnown RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 BRAT1Q6PJG6 821 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 ZNF852Q6ZMS4 543 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 MARK2Q7KZI7 788 aaKnown RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 KCNMB4Q86W47 210 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 CTAGE3PQ8IX95 158 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 CNPY4Q8N129 248 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 HCAR2Q8TDS4 363 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 STYXQ8WUJ0 223 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms