RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 ZNF662Q6ZS27 426 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 DPPA4Q7L190 304 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 SPATS2Q86XZ4 545 aaKnown RBP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 NDUFAF2Q8N183 169 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 OR13H1Q8NG92 308 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 BMFQ96LC9 184 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 QKIQ96PU8 341 aaKnown RBP eCLIP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 LENG8Q96PV6 779 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 SMIM14Q96QK8 99 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 RBM15Q96T37 977 aaKnown RBP eCLIP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 KLF6Q99612 283 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 C1QTNF7Q9BXJ2 289 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 GLOD4Q9HC38 313 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 TM7SF3Q9NS93 570 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 DNAAF2Q9NVR5 837 aaKnown RBP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 KLHL8Q9P2G9 620 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-217ENST00000556533 HS3ST3A1Q9Y663 406 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 DMXL1Q9Y485 3027 aa17.17■□□□□ 0.34
PSEN1-217ENST00000556533 GOLGA6L9A6NEM1 432 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 A6NNZ2 444 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 HACD1B0YJ81 288 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 MTSS1O43312 755 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 MMP2P08253 660 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 ALPIP09923 528 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 CYP2A6P11509 494 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-217ENST00000556533 RBL1P28749 1068 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 VIPR1P32241 457 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 SKOR1P84550 965 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 WASHC5Q12768 1159 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 RALGDSQ12967 914 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 XRCC4Q13426 336 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 LRRC14Q15048 493 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 PCSK7Q16549 785 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 MEI1Q5TIA1 1274 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 LIPIQ6XZB0 460 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 PID1Q7Z2X4 250 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 DGLUCYQ7Z3D6 616 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 IQCHQ86VS3 1027 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 LPCAT1Q8NF37 534 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 SPATA22Q8NHS9 363 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 PIH1D2Q8WWB5 315 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 ASB12Q8WXK4 309 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 CENPTQ96BT3 561 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 TEKT5Q96M29 485 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 SLC25A51Q9H1U9 297 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 PCDH9Q9HC56 1237 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 MBNL1Q9NR56 388 aaKnown RBP17.16■□□□□ 0.34
PSEN1-217ENST00000556533 UBP1Q9NZI7 540 aa17.16■□□□□ 0.34
PSEN1-217ENST00000556533 A0A0U1RQS6 177 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 PMPCBO75439 489 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 RECQL5O94762 991 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 HNF1BP35680 557 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 OVGP1Q12889 678 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 ZNF423Q2M1K9 1284 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 SEL1L2Q5TEA6 688 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 USP45Q70EL2 814 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 ABI3BPQ7Z7G0 1075 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 CDKL3Q8IVW4 592 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 ZNF567Q8N184 647 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 SETD7Q8WTS6 366 aaKnown RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 IMP4Q96G21 291 aaKnown RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 ELF4Q99607 663 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 FERMT1Q9BQL6 677 aa17.15■□□□□ 0.34
PSEN1-217ENST00000556533 TDRD1Q9BXT4 1180 aaKnown RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 TRMT1Q9NXH9 659 aaKnown RBP17.15■□□□□ 0.34
PSEN1-217ENST00000556533 TCRBV7S2A1N4TA0A589 114 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 NPIPB15A6NHN6 443 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-217ENST00000556533 TM4SF5O14894 197 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 SH3BP5O60239 455 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 FZD6O60353 706 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 DFNA5O60443 496 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 PCCBP05166 539 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 RBP3P10745 1247 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 CD59P13987 128 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 NFKB1P19838 968 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 ARRB1P49407 418 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-217ENST00000556533 CCT8P50990 548 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 ARHGEF7Q14155 803 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 IRF4Q15306 451 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 WSCD2Q2TBF2 565 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 ZNF542PQ5EBM4 170 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 TSPAN33Q86UF1 283 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 TP53I13Q8NBR0 393 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-217ENST00000556533 DENND6BQ8NEG7 585 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 DEFB124Q8NES8 71 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 TRIM58Q8NG06 486 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 SPOCK2Q92563 424 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 IFT43Q96FT9 208 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 SCRN2Q96FV2 425 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 PDLIM2Q96JY6 352 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 CAMK1GQ96NX5 476 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 ADGRE3Q9BY15 652 aa17.14■□□□□ 0.33
PSEN1-217ENST00000556533 A0A0J9YYE9 177 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 A0A1B0GTQ1 180 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 CFAP69A5D8W1 941 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 KCNN4O15554 427 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 ZSCAN12O43309 604 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 STK10O94804 968 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms