RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ASB9Q96DX5 294 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 CENPNQ96H22 339 aaPredicted RBP15.08■□□□□ 0
ARHGEF40-207ENST00000556399 CDH9Q9ULB4 789 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 IRF6O14896 467 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 RGS14O43566 566 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 SOAT1P35610 550 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 SLC5A3P53794 718 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 TAS2R39P59534 338 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 ELMSAN1Q6PJG2 1045 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 ARHGAP36Q6ZRI8 547 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 COX4I2Q96KJ9 171 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 CNTN6Q9UQ52 1028 aa15.08■□□□□ 0
ARHGEF40-207ENST00000556399 COPG1Q9Y678 874 aaKnown RBP15.08■□□□□ 0
ARHGEF40-207ENST00000556399 MT-CYBP00156 380 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 NFE2Q16621 373 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 SPDYE7PQ495Y7 208 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TTC23LQ6PF05 361 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 STX19Q8N4C7 294 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 NRG4Q8WWG1 115 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 MYLPFQ96A32 169 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 FBXO44Q9H4M3 255 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 MPP6Q9NZW5 540 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ALS2Q96Q42 1657 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 SMIM28A0A1B0GU29 152 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 FGFR1P11362 822 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 RPS9P46781 194 aaKnown RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 RSBN1Q5VWQ0 802 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 PROSER1Q86XN7 944 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 CPSF7Q8N684 471 aaKnown RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 SLC16A10Q8TF71 515 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TWIST2Q8WVJ9 160 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 USP29Q9HBJ7 922 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 C8orf4Q9NR00 106 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 RECQL5O94762 991 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 MED26O95402 600 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ALOX12P18054 663 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 NDUFV1P49821 464 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 MRPL28Q13084 256 aaKnown RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 GPRIN3Q6ZVF9 776 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 LRRC49Q8IUZ0 686 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TMEM132CQ8N3T6 1108 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 AADATQ8N5Z0 425 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 UTP15Q8TED0 518 aaKnown RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 FCRL2Q96LA5 508 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 SEMA3CQ99985 751 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ABHD16BQ9H3Z7 469 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TMEM165Q9HC07 324 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TCAF1Q9Y4C2 921 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TRPM3Q9HCF6 1732 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 POU1F1P28069 291 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 SLC7A1P30825 629 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ITGA7Q13683 1181 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 MAPKAPK3Q16644 382 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 CTXN3Q4LDR2 81 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 INTS6LQ5JSJ4 861 aaKnown RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 DCLRE1AQ6PJP8 1040 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 OLFML1Q6UWY5 402 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ADGRG6Q86SQ4 1221 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ERI1Q8IV48 349 aaKnown RBP15.07■□□□□ 0
ARHGEF40-207ENST00000556399 FBXO27Q8NI29 283 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ZDHHC2Q9UIJ5 367 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 TBC1D30Q9Y2I9 924 aa15.07■□□□□ 0
ARHGEF40-207ENST00000556399 ANXA6P08133 673 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 LMO2P25791 158 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 GCAP28676 217 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 SCNN1GP51170 649 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 CCNIQ14094 377 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 ZNF846Q147U1 533 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 EGFLAMQ63HQ2 1017 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 DPY19L2P1Q6NXN4 242 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TMEM110Q86TL2 294 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 LDB1Q86U70 411 aaPredicted RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 ROPN1LQ96C74 230 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 SPASTQ9UBP0 616 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 CNOT6Q9ULM6 557 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TDRKHQ9Y2W6 561 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 NEMP2A6NFY4 417 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 PLSCR1O15162 318 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 CD3EAPO15446 510 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 LRIG2O94898 1065 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 S100A3P33764 101 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 RHOAP61586 193 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TAF1CQ15572 869 aaPredicted RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 LBX2Q6XYB7 198 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 KLRG1Q96E93 195 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 FOPNLQ96NB1 174 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 PGLYRP2Q96PD5 576 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 KLHL5Q96PQ7 755 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 CEP44Q9C0F1 390 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 REXO4Q9GZR2 422 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 UXTQ9UBK9 157 aaPredicted RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 ITGB1BP2Q9UKP3 347 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 PTCH2Q9Y6C5 1203 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 SOWAHBA6NEL2 793 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TRIM24O15164 1050 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 SEC24AO95486 1093 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 CCR3P51677 355 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 PTPRNQ16849 979 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 ZC3H12BQ5HYM0 836 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 GCNT7Q6ZNI0 430 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms