RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TDRPQ86YL5 185 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 LRRC49Q8IUZ0 686 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 CCDC13Q8IYE1 715 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 SLC39A11Q8N1S5 342 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF276Q8N554 614 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 COLGALT1Q8NBJ5 622 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 STKLD1Q8NE28 680 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FBXO36Q8NEA4 188 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF461Q8TAF7 563 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 BCL7CQ8WUZ0 217 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 OVCA2Q8WZ82 227 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 ARHGEF2Q92974 986 aaKnown RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 GAL3ST3Q96A11 431 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 HDAC11Q96DB2 347 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 BTN2A3PQ96KV6 586 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 FCRL2Q96LA5 508 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 PPP1R2P1Q96PQ5 205 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 LGMNQ99538 433 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 HERC2P3Q9BVR0 1158 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 LRRC4CQ9HCJ2 640 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 ANLNQ9NQW6 1124 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 EIF2B3Q9NR50 452 aaKnown RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MARCH2Q9P0N8 246 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 SEPT10Q9P0V9 454 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 KLHL8Q9P2G9 620 aaPredicted RBP6.93□□□□□ -1.3
SLIRP-204ENST00000555890 IGSF9Q9P2J2 1179 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 LGALS13Q9UHV8 139 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 LZTS1Q9Y250 596 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 SSX2IPQ9Y2D8 614 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 MFHAS1Q9Y4C4 1052 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 IKBKGQ9Y6K9 419 aa6.93□□□□□ -1.3
SLIRP-204ENST00000555890 ADGRG4Q8IZF6 3080 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 F5P12259 2224 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 AHCTF1Q8WYP5 2266 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 DOCK4Q8N1I0 1966 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 HIVEP1P15822 2718 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TCRBV7S3A2A0A539 114 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 SLC12A8A0AV02 714 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 WDR27A2RRH5 827 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 C2orf71A6NGG8 1288 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 C4orf47A7E2U8 309 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ERI2A8K979 691 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 POC1B-GALNT4F8VUJ3 575 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 I6L893 689 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 AP3B1O00203 1094 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 C2CD2LO14523 706 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TRDMT1O14717 391 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MSI1O43347 362 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 SOAT2O75908 522 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ABLIM3O94929 683 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 VNN2O95498 520 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MOCS2O96007 188 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CPP00450 1065 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 URODP06132 367 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CSH1P0DML2 217 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CSH2P0DML3 217 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CD33P20138 364 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CCNCP24863 283 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 HOXC13P31276 330 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ELF1P32519 619 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 STX2P32856 288 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ATP5C1P36542 298 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 GMPRP36959 345 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 GARSP41250 739 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ELK3P41970 407 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MSH2P43246 934 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MAGEA9P43362 315 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MMP13P45452 471 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ALDH1A3P47895 512 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 PPP3CCP48454 512 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TUBP50607 506 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 GEMIN4P57678 1058 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 IFI35P80217 286 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 DSG1Q02413 1049 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 GAD2Q05329 585 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 WASHC5Q12768 1159 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 VEPH1Q14D04 833 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF423Q2M1K9 1284 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TNFAIP8L3Q5GJ75 292 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 RARS2Q5T160 578 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 UBAP2Q5T6F2 1119 aaKnown RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 LGSNQ5TDP6 509 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 FAXCQ5TGI0 409 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 NUGGCQ68CJ6 796 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TIGD7Q6NT04 549 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CES5AQ6NT32 575 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 RSPO2Q6UXX9 243 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 GPR155Q7Z3F1 870 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TMEM173Q86WV6 379 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TICAM1Q8IUC6 712 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 GPR65Q8IYL9 337 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 RNF168Q8IYW5 571 aaPredicted RBP6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CNPY4Q8N129 248 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ZNF567Q8N184 647 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 ATPAF2Q8N5M1 289 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 TTC9BQ8N6N2 239 aa6.92□□□□□ -1.3
SLIRP-204ENST00000555890 MRPL43Q8N983 215 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms