RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ZNF419Q96HQ0 510 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 HIC2Q96JB3 615 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 UPF3AQ9H1J1 476 aaKnown RBP16.25■□□□□ 0.19
TUBB3-209ENST00000555609 GSTO2Q9H4Y5 243 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 C8orf4Q9NR00 106 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 ARMC1Q9NVT9 282 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 ATXN10Q9UBB4 475 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 SQORQ9Y6N5 450 aa16.25■□□□□ 0.19
TUBB3-209ENST00000555609 NUP205Q92621 2012 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 MROH6A6NGR9 719 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 MEIS3P2A8K0S8 358 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 RHOQP17081 205 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 RPS6KA3P51812 740 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 IKBKEQ14164 716 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 BTG3Q14201 252 aaPredicted RBP16.24■□□□□ 0.19
TUBB3-209ENST00000555609 FSCN1Q16658 493 aaKnown RBP16.24■□□□□ 0.19
TUBB3-209ENST00000555609 NADK2Q4G0N4 442 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 ZNF678Q5SXM1 525 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 SPATA6LQ8N4H0 392 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 TEX26Q8N6G2 289 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 RNF148Q8N7C7 305 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 HMGCLL1Q8TB92 370 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 PPP1R13LQ8WUF5 828 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 ATP6V1E2Q96A05 226 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 RIMKLBQ9ULI2 386 aa16.24■□□□□ 0.19
TUBB3-209ENST00000555609 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 FAM155AB1AL88 458 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-209ENST00000555609 TNFRSF10BO14763 440 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 PEX11BO96011 259 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 ASLP04424 464 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 MSX2P35548 267 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-209ENST00000555609 PGGT1BP53609 377 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 TUBA4AP68366 448 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 CDKL1Q00532 357 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 COQ5Q5HYK3 327 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 C6orf52Q5T4I8 152 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 MSANTD2Q6P1R3 559 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 KLHDC10Q6PID8 442 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 PAOXQ6QHF9 649 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 ARHGAP22Q7Z5H3 698 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 GALNT4Q8N4A0 578 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 PCDH20Q8N6Y1 951 aaKnown RBP16.23■□□□□ 0.19
TUBB3-209ENST00000555609 TADA1Q96BN2 335 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 TIMMDC1Q9NPL8 285 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 HS3ST4Q9Y661 456 aa16.23■□□□□ 0.19
TUBB3-209ENST00000555609 NEMP2A6NFY4 417 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 AQP12BA6NM10 295 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 VPS4BO75351 444 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 TMCC1O94876 653 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 BMP2P12643 396 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 CHRNA4P43681 627 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 SLC5A3P53794 718 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 MARC1Q5VT66 337 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 OVOS1Q6IE37 1185 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 RAB44Q7Z6P3 723 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 CARM1Q86X55 608 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 DHFR2Q86XF0 187 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 SPATA2LQ8IUW3 424 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 AQP12AQ8IXF9 295 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 GPR150Q8NGU9 434 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 TSPEARQ8WU66 669 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 CASP10Q92851 521 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 MPP4Q96JB8 637 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 PRPF18Q99633 342 aaKnown RBP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 SENP6Q9GZR1 1112 aaPredicted RBP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 COQ10BQ9H8M1 238 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 TMLHEQ9NVH6 421 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 CACNG4Q9UBN1 327 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 TLR6Q9Y2C9 796 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 PRORSD1PA6NEY8 169 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 B3GAT3O94766 335 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 OR6B1O95007 311 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 S1PR4O95977 384 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 KCNA5P22460 613 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 HERVK_113P63132 956 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 ACVR1Q04771 509 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 MAP7D1Q3KQU3 841 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 PPP4R4Q6NUP7 873 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 SCD5Q86SK9 330 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 HERC6Q8IVU3 1022 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 METTL25Q8N6Q8 603 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 OR13J1Q8NGT2 312 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 SCAMP5Q8TAC9 235 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 RHEBL1Q8TAI7 183 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 HM13Q8TCT9 377 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 RSPH1Q8WYR4 309 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 NMD3Q96D46 503 aaKnown RBP16.22■□□□□ 0.19
TUBB3-209ENST00000555609 SUSD3Q96L08 255 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 ERVK-6Q9BXR3 956 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 MUC13Q9H3R2 512 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 CYP4F12Q9HCS2 524 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 PNPLA3Q9NST1 481 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 TMEM248Q9NWD8 314 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 CCDC167Q9P0B6 97 aa16.22■□□□□ 0.19
TUBB3-209ENST00000555609 H6PDO95479 791 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 ETS2P15036 469 aa16.21■□□□□ 0.19
TUBB3-209ENST00000555609 ZNF23P17027 643 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms