RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 WDR92Q96MX6 357 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 ZNF641Q96N77 438 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-208ENST00000555576 MCEEQ96PE7 176 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 NCAPGQ9BPX3 1015 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 VPS16Q9H269 839 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 LRRN3Q9H3W5 708 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 CATSPERBQ9H7T0 1116 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 FGF22Q9HCT0 170 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 UBA2Q9UBT2 640 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-208ENST00000555576 KLQ9UEF7 1012 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 DOLKQ9UPQ8 538 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 ATP8A1Q9Y2Q0 1164 aa13.35□□□□□ -0.27
TUBB3-208ENST00000555576 PTPN13Q12923 2485 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 NAV2Q8IVL1 2488 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 CFAP69A5D8W1 941 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
TUBB3-208ENST00000555576 FGF10O15520 208 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-208ENST00000555576 CTSEP14091 401 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 PNLIPP16233 465 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 STAT1P42224 750 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 NDST2P52849 883 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
TUBB3-208ENST00000555576 AFMIDQ63HM1 303 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 ERAP2Q6P179 960 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 RD3Q7Z3Z2 195 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 SPRED1Q7Z699 444 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 SLITRK4Q8IW52 837 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 TSEN2Q8NCE0 465 aaKnown RBP13.34□□□□□ -0.27
TUBB3-208ENST00000555576 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 CNPY3Q9BT09 278 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 LOXL2Q9Y4K0 774 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
TUBB3-208ENST00000555576 ARHGEF17Q96PE2 2063 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-208ENST00000555576 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 TRAFD1O14545 582 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 LIPCP11150 499 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 GLB1P16278 677 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 ITIH1P19827 911 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 XPAP23025 273 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 HTR7P34969 479 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 TRIM23P36406 574 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 ETV5P41161 510 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 CSNK1DP48730 415 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 SCYL2Q6P3W7 929 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 CYP4V2Q6ZWL3 525 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 NPWQ8N729 165 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 OR56A4Q8NGH8 313 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 CCL4L1Q8NHW4 92 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 CELF6Q96J87 481 aaKnown RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 TMEM74Q96NL1 305 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 SYT11Q9BT88 431 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 LGR4Q9BXB1 951 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 SLC39A8Q9C0K1 460 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 STRADBQ9C0K7 418 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 MRPL40Q9NQ50 206 aaKnown RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
TUBB3-208ENST00000555576 PISDQ9UG56 409 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 RNF215Q9Y6U7 377 aa13.33□□□□□ -0.28
TUBB3-208ENST00000555576 PRAMEF33A0A0G2JMD5 474 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 C9orf172C9J069 976 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 PRAMEF10O60809 474 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 TNFP01375 233 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 HOXC4P09017 264 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-208ENST00000555576 WT1P19544 449 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-208ENST00000555576 PAPOLAP51003 745 aaKnown RBP13.32□□□□□ -0.28
TUBB3-208ENST00000555576 TPI1P60174 286 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 SYCP1Q15431 976 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 CA9Q16790 459 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 C14orf28Q4W4Y0 310 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 LIPIQ6XZB0 460 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 DPPA4Q7L190 304 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 C17orf82Q86X59 251 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-208ENST00000555576 DTX1Q86Y01 620 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 ARFGAP1Q8N6T3 406 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 ATL2Q8NHH9 583 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 SGF29Q96ES7 293 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 PEBP4Q96S96 227 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 TMEM168Q9H0V1 697 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 CLMPQ9H6B4 373 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 FOXJ2Q9P0K8 574 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 FLNCQ14315 2725 aa13.32□□□□□ -0.28
TUBB3-208ENST00000555576 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 TNFRSF10CO14798 259 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 NUDT21O43809 227 aaKnown RBP13.31□□□□□ -0.28
TUBB3-208ENST00000555576 SLC28A2O43868 658 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 ITGB2P05107 769 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 ELFN1P0C7U0 828 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 JMJD7P0C870 316 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 ITGB6P18564 788 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 SERPINA4P29622 427 aa13.31□□□□□ -0.28
TUBB3-208ENST00000555576 COPB1P53618 953 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms