RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 CRYL1Q9Y2S2 319 aa10.25□□□□□ -0.77
NEK9-205ENST00000555405 C2orf81A6NN90 581 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 ZNF821O75541 412 aaPredicted RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 PCDH8O95206 1070 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 FGF1P05230 155 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 IVLP07476 585 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 CR2P20023 1033 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 HLA-DPA1P20036 260 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 POU3F3P20264 500 aaPredicted RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 ADRA1DP25100 572 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 GMPRP36959 345 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 PLK1P53350 603 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 DMC1Q14565 340 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 SLC44A4Q53GD3 710 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 ZNF470Q6ECI4 717 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 KIAA1324Q6UXG2 1013 aaKnown RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 FAM151BQ6UXP7 276 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 LRRC6Q86X45 466 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 ZSWIM9Q86XI8 627 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 MDGA1Q8NFP4 955 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 MRGPRX3Q96LB0 322 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 NECAB3Q96P71 396 aaPredicted RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 SLC13A1Q9BZW2 595 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 FBXO6Q9NRD1 293 aaPredicted RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 EPS15L1Q9UBC2 864 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 IL36AQ9UHA7 158 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 PSAT1Q9Y617 370 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 ATG2AQ2TAZ0 1938 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 HEATR9A2RTY3 570 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 ZNF189O75820 626 aaPredicted RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 ATXN1LP0C7T5 689 aaKnown RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 CREB1P16220 341 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 UGT1A6P19224 532 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 UGT1A1P22309 533 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 UGT1A4P22310 534 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 ADRA1AP35348 466 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 UGT1A3P35503 534 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 UGT1A5P35504 534 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 HNF1BP35680 557 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 PXNP49023 591 aaPredicted RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 STRA8Q7Z7C7 330 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 GPATCH11Q8N954 259 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 OR8D1Q8WZ84 308 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 FAM3CQ92520 227 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 FEM1CQ96JP0 617 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 LMLNQ96KR4 655 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 TXLNGYQ9BZA5 131 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 RETREG1Q9H6L5 497 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 SARS2Q9NP81 518 aaKnown RBP10.24□□□□□ -0.77
NEK9-205ENST00000555405 FKBPLQ9UIM3 349 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 COQ6Q9Y2Z9 468 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 TCAF1Q9Y4C2 921 aa10.24□□□□□ -0.77
NEK9-205ENST00000555405 EIF3HO15372 352 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■■■□ 24.9
NEK9-205ENST00000555405 PGLSO95336 258 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 ASLP04424 464 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 MLNP12872 115 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 TCF3P15923 654 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 NSUN2Q08J23 767 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEK9-205ENST00000555405 TDGQ13569 410 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 STAT4Q14765 748 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 SMAD2Q15796 467 aaKnown RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 TTC17Q96AE7 1141 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 CERS2Q96G23 380 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 FAM129AQ9BZQ8 928 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 FAM50BQ9Y247 325 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 PKP3Q9Y446 797 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 WDR87Q6ZQQ6 2873 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 E7ESA3 106 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 RNASEH2AO75792 299 aaKnown RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 SUN1O94901 812 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 CRTAMO95727 393 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 CTSLP07711 333 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 STX2P32856 288 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 MPP1Q00013 466 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 STARD3Q14849 445 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 MREGQ8N565 214 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 RPLP0P6Q8NHW5 317 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 C12orf65Q9H3J6 166 aaKnown RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 ZFYVE1Q9HBF4 777 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 B4GALT6Q9UBX8 382 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 FBXO10Q9UK96 956 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 A0A1W2PPM1 405 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 TRIM49D1C9J1S8 452 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 NEFHP12036 1026 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 HOXB2P14652 356 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 ITGB6P18564 788 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 PAMP19021 973 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 MAT2AP31153 395 aaKnown RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 MAGEA6P43360 314 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 CDKN1CP49918 316 aaPredicted RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 CSE1LP55060 971 aaKnown RBP10.23□□□□□ -0.77
NEK9-205ENST00000555405 TCEA2Q15560 299 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 TSTD2Q5T7W7 516 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 KIAA1211LQ6NV74 962 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 NEPROQ6NW34 567 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 Q6ZS52 159 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms