RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CXorf51AA0A1B0GTR3 108 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 TCRBV9S1A1TA0A576 114 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 SMIM23A6NLE4 172 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 AGPSO00116 658 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 KPNA3O00505 521 aaPredicted RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 MID1O15344 667 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PSMD3O43242 534 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PGLSO95336 258 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 NDST3O95803 873 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 IL1BP01584 269 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 TIMP2P16035 220 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 NMBRP28336 390 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PXNP49023 591 aaPredicted RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 SATB1Q01826 763 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 BCL2L1Q07817 233 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 CFAP58Q5T655 872 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 GDPD4Q6W3E5 623 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 RFLNAQ6ZTI6 216 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 C3orf62Q6ZUJ4 267 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 METTL3Q86U44 580 aaKnown RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 TSPAN33Q86UF1 283 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PALM2Q8IXS6 379 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 FRMD1Q8N878 549 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 KDM1BQ8NB78 822 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 MDGA1Q8NFP4 955 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 ECHDC3Q96DC8 303 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 MRRFQ96E11 262 aaKnown RBP10.82□□□□□ -0.68
TDP1-211ENST00000555178 PPP1R2P1Q96PQ5 205 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 TSPYL1Q9H0U9 437 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 ARNT2Q9HBZ2 717 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 HAUS2Q9NVX0 235 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 BFARQ9NZS9 450 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 ARL5AQ9Y689 179 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 CEP192Q8TEP8 1941 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 ABCA7Q8IZY2 2146 aa10.82□□□□□ -0.68
TDP1-211ENST00000555178 GOLGA8KD6RF30 607 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 DRD3P35462 400 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 ABL2P42684 1182 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 SLCO1A2P46721 670 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 RPS14P62263 151 aaKnown RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 MRPS21P82921 87 aaKnown RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 CRYMQ14894 314 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 EPS8L3Q8TE67 593 aaKnown RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 FBF1Q8TES7 1133 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 EDAQ92838 391 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 ZNF669Q96BR6 464 aaPredicted RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 CPEB1Q9BZB8 566 aaKnown RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 IL22Q9GZX6 179 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 RSPH9Q9H1X1 276 aaPredicted RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 ATP13A3Q9H7F0 1226 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 SMYD2Q9NRG4 433 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 MMP17Q9ULZ9 603 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 RPS6KL1Q9Y6S9 549 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 C1QAP02745 245 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 FGF1P05230 155 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 GABRG2P18507 467 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 HLA-DPA1P20036 260 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 RECQLP46063 649 aaPredicted RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 ZNF844Q08AG5 666 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 CNTN1Q12860 1018 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 MTAPQ13126 283 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 CBLBQ13191 982 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 ELAVL3Q14576 367 aaKnown RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 CRY1Q16526 586 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 LONRF1Q17RB8 773 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 PREPLQ4J6C6 727 aaPredicted RBP10.81□□□□□ -0.68
TDP1-211ENST00000555178 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 HHIPQ96QV1 700 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 DLGAP2Q9P1A6 1054 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 SAMD15Q9P1V8 674 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 CTNNAL1Q9UBT7 734 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 TCAF1Q9Y4C2 921 aa10.81□□□□□ -0.68
TDP1-211ENST00000555178 ZCWPW2A0A1B0GU75 182 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 NPIPB15A6NHN6 443 aaPredicted RBP10.8□□□□□ -0.68
TDP1-211ENST00000555178 C16orf96A6NNT2 1141 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CXorf49A8MYA2 514 aaPredicted RBP10.8□□□□□ -0.68
TDP1-211ENST00000555178 ANKRD66B4E2M5 251 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 UGT1A9O60656 530 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 PGAM1P18669 254 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 NDUFV2P19404 249 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 LHCGRP22888 699 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CES1P23141 567 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SERPINA4P29622 427 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 HNF1BP35680 557 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 NPY2RP49146 381 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 TAS2R38P59533 333 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 SLC14A2Q15849 920 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 CDKN3Q16667 212 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 ARMC12Q5T9G4 340 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 ESRP1Q6NXG1 681 aaKnown RBP10.8□□□□□ -0.68
TDP1-211ENST00000555178 KDM7AQ6ZMT4 941 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 TMPRSS6Q8IU80 811 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 PAF1Q8N7H5 531 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 OR8D1Q8WZ84 308 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 FUBP1Q96AE4 644 aaKnown RBP10.8□□□□□ -0.68
TDP1-211ENST00000555178 LRRC39Q96DD0 335 aa10.8□□□□□ -0.68
TDP1-211ENST00000555178 MSANTD3Q96H12 275 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms