RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 CDH17Q12864 832 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 GPS1Q13098 491 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 AGERQ15109 404 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 ELF2Q15723 593 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SLC1A5Q15758 541 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 PCSK7Q16549 785 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TMEM52BQ4KMG9 183 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SYCP2LQ5T4T6 812 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 ZDHHC20Q5W0Z9 365 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 KCTD11Q693B1 232 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 C8orf74Q6P047 294 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RANBP10Q6VN20 620 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 B4GALNT4Q76KP1 1039 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 DPPA4Q7L190 304 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 LPCAT2Q7L5N7 544 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 RABEPKQ7Z6M1 372 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 CACUL1Q86Y37 369 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 JAMLQ86YT9 394 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 KLHL7Q8IXQ5 586 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 PPIL6Q8IXY8 311 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 MAML2Q8IZL2 1156 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 MMGT1Q8N4V1 131 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 DENND6BQ8NEG7 585 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 IPMKQ8NFU5 416 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 OR14C36Q8NHC7 312 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SPATA22Q8NHS9 363 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 CXorf40AQ8TE69 158 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 PIH1D2Q8WWB5 315 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 ASB12Q8WXK4 309 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 ARRDC3Q96B67 414 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TOE1Q96GM8 510 aaKnown RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SNF8Q96H20 258 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 OXNAD1Q96HP4 312 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 MRGPRX2Q96LB1 330 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 MCCC1Q96RQ3 725 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TRIB3Q96RU7 358 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 KRT12Q99456 494 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TBL1YQ9BQ87 522 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 MLPHQ9BV36 600 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TPSD1Q9BZJ3 242 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 DUSP15Q9H1R2 295 aaPredicted RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 NEUROG2Q9H2A3 272 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 C10orf88Q9H8K7 445 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 L2HGDHQ9H9P8 463 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 ETNK1Q9HBU6 452 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 XAB2Q9HCS7 855 aaKnown RBP8.1□□□□□ -1.11
LINC01397-201ENST00000554808 C2orf42Q9NWW7 574 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 SMARCAL1Q9NZC9 954 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 CYP8B1Q9UNU6 501 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 DMTF1Q9Y222 760 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 CHKBQ9Y259 395 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 GON4LQ3T8J9 2241 aa8.1□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3DA0A087WVF3 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3IA0A087WXS9 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3EA0A087X179 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3KA0A087X1G2 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 RGSL1A5PLK6 1076 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3FA6NER0 549 aaPredicted RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 EFCAB8A8MWE9 144 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3LB9A6J9 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 DNALI1O14645 258 aaPredicted RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TOR1BO14657 336 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 MAP3K13O43283 966 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PYGLP06737 847 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 ELFN1P0C7U0 828 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3HP0C7X1 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 MLNP12872 115 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TIMP2P16035 220 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 GKP32189 559 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 ADRA1AP35348 466 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 HOXD12P35452 270 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 FNTBP49356 437 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 CCR5P51681 352 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 RPL6Q02878 288 aaKnown RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 CAV1Q03135 178 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 C2orf54Q08AI8 447 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 CALCOCO2Q13137 446 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 KCNJ11Q14654 390 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 MORF4L2Q15014 288 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 SETMARQ53H47 684 aaPredicted RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 WDR45BQ5MNZ6 344 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PMS2CLQ68D20 193 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3GQ6DHY5 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3CQ6IPX1 549 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 CEP68Q76N32 757 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 ASCL5Q7RTU5 278 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 TBC1D3Q8IZP1 549 aaPredicted RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PDCD7Q8N8D1 485 aaKnown RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 MCUQ8NE86 351 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 LPCAT1Q8NF37 534 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PTCD2Q8WV60 388 aaKnown RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PEX13Q92968 403 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 VOPP1Q96AW1 172 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 LOXL4Q96JB6 756 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 ZC3H10Q96K80 434 aaKnown RBP8.09□□□□□ -1.11
LINC01397-201ENST00000554808 FICDQ9BVA6 458 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PCDH12Q9NPG4 1184 aa8.09□□□□□ -1.11
LINC01397-201ENST00000554808 PKD2L2Q9NZM6 624 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms