RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 TGM2P21980 687 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 MAT2AP31153 395 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 NNMTP40261 264 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 CSKP41240 450 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 STAT6P42226 847 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PSMD8P48556 350 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 SLC11A2P49281 568 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 CASP4P49662 377 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 SLC8A3P57103 927 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PPP2CBP62714 309 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PPP2CAP67775 309 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 ECT2LQ008S8 904 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 AMPD3Q01432 767 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 INCA1Q0VD86 236 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 ELAVL3Q14576 367 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 SLC9A5Q14940 896 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 RAB41Q5JT25 222 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PIK3R6Q5UE93 754 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 FAM46CQ5VWP2 391 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 RNF219Q5W0B1 726 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 NEK5Q6P3R8 708 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 VHLLQ6RSH7 139 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 CLEC18BQ6UXF7 455 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 RBM44Q6ZP01 1051 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 EPM2AIP1Q7L775 607 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 BRAPQ7Z569 592 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 C14orf80Q86SX3 495 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PIGZQ86VD9 579 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 TRIM69Q86WT6 500 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 DCP2Q8IU60 420 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 MFN1Q8IWA4 741 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 C12orf56Q8IXR9 622 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 STK40Q8N2I9 435 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 TMEM145Q8NBT3 493 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 CLEC18CQ8NCF0 446 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 WDR48Q8TAF3 677 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 IFI44Q8TCB0 444 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PARD3BQ8TEW8 1205 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 RNF139Q8WU17 664 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PTPRN2Q92932 1015 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 FAM131CQ96AQ9 280 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 TWNKQ96RR1 684 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 DDX50Q9BQ39 737 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 SLC25A18Q9H1K4 315 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 GEMIN8Q9NWZ8 242 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 HMGXB4Q9UGU5 601 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 SLCO3A1Q9UIG8 710 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 INTS6Q9UL03 887 aaKnown RBP4.96□□□□□ -1.62
ATXN3-229ENST00000554672 MAN2B2Q9Y2E5 1009 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 PCDHGA7Q9Y5G6 932 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 CSNK1G3Q9Y6M4 447 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 MYOFQ9NZM1 2061 aa4.96□□□□□ -1.62
ATXN3-229ENST00000554672 UNC79Q9P2D8 2635 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 OBSL1O75147 1896 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 GOLGA6L7A0A1B0GV03 622 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 TYW5A2RUC4 315 aaKnown RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 EME2A4GXA9 379 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 LRRIQ3A6PVS8 624 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 TMX2-CTNND1H3BSU7 103 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 IKBKBO14920 756 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 SLC31A1O15431 190 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 ACSL4O60488 711 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 RTN2O75298 545 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 CENPBP07199 599 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 C8BP07358 591 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 GJB2P29033 226 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 SLC5A2P31639 672 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 DRD3P35462 400 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 TKTL1P51854 596 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 HNRNPKP61978 463 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 PLP2Q04941 152 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 SULT2A1Q06520 285 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 CCDC15Q0P6D6 951 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 EIF3IQ13347 325 aaKnown RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 ZNF177Q13360 481 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 MORC3Q14149 939 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 TBR1Q16650 682 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 CDKN3Q16667 212 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 KNOP1Q1ED39 458 aaKnown RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 POM121L1PQ3SYA9 428 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 ZACNQ401N2 412 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 PITRM1Q5JRX3 1037 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 FAM26FQ5R3K3 315 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 BSPRYQ5W0U4 402 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 NUGGCQ68CJ6 796 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 SPOPLQ6IQ16 392 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 ZCCHC8Q6NZY4 707 aaKnown RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 RFWD3Q6PCD5 774 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 EFL1Q7Z2Z2 1120 aaKnown RBP4.95□□□□□ -1.62
ATXN3-229ENST00000554672 DSG4Q86SJ6 1040 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 NELFCDQ8IXH7 590 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 FBXO39Q8N4B4 442 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 TTC39CQ8N584 583 aa4.95□□□□□ -1.62
ATXN3-229ENST00000554672 FAM26EQ8N5C1 309 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms