RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 KRT13P13646 458 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 P4HA1P13674 534 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ARSAP15289 507 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CCNE1P24864 410 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ANXA13P27216 316 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 GTF2H1P32780 548 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CRHR1P34998 444 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 AVPR1AP37288 418 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 MXI1P50539 228 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CHN2P52757 468 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 NDST1P52848 882 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SLC5A3P53794 718 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SLC7A9P82251 487 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ZXDBP98169 803 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 INCA1Q0VD86 236 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TAF10Q12962 218 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 MTAPQ13126 283 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 PDGFRLQ15198 375 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SGSM1Q2NKQ1 1148 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ITPRIPL2Q3MIP1 535 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ZNF528Q3MIS6 628 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CBWD6Q4V339 395 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 PDCD4Q53EL6 469 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CBWD3Q5JTY5 395 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CBWD5Q5RIA9 395 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 MBNL2Q5VZF2 373 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 C1orf228Q6PIY5 440 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 Q6ZS52 159 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 DENND5BQ6ZUT9 1274 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 RHOUQ7L0Q8 258 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 UNC93AQ86WB7 457 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 RALGPS2Q86X27 583 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ADSSL1Q8N142 457 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CRYBG2Q8N1P7 616 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 PQLC1Q8N2U9 271 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ARL14EPQ8N8R7 260 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 GPR156Q8NFN8 814 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TTC8Q8TAM2 541 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CSGALNACT1Q8TDX6 532 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TAF4BQ92750 862 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 NELL1Q92832 810 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SEMA4DQ92854 862 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 EEF2KMTQ96G04 330 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SMARCD1Q96GM5 515 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CCDC34Q96HJ3 373 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 GSDMAQ96QA5 445 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 NELL2Q99435 816 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 SMOQ99835 787 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ADI1Q9BV57 179 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 LMAN1LQ9HAT1 526 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TMEM8AQ9HCN3 771 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TRPC7Q9HCX4 862 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 DMAP1Q9NPF5 467 aaPredicted RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 RBM12Q9NTZ6 932 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 TDP1Q9NUW8 608 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 RMND1Q9NWS8 449 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 IL37Q9NZH6 218 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 FBXO4Q9UKT5 387 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 MRPS17Q9Y2R5 130 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 PCDHGA2Q9Y5H1 932 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 WNT6Q9Y6F9 365 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 R4GN57 208 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 MYO18AQ92614 2054 aaKnown RBP4.37□□□□□ -1.71
VTI1B-203ENST00000554636 ATP8B3O60423 1300 aa4.37□□□□□ -1.71
VTI1B-203ENST00000554636 CEP250Q9BV73 2442 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 SPAG17Q6Q759 2223 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 GOLGA6L4A6NEF3 574 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 CXorf49A8MYA2 514 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 HHLA1C9JL84 531 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 K7ESF4 209 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 TRDMT1O14717 391 aaKnown RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 CETN3O15182 167 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 NCAM2O15394 837 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 KINO60870 393 aaKnown RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 BEST1O76090 585 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 RTN3O95197 1032 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 PAPSS2O95340 614 aaPredicted RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 SMC2O95347 1197 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 GASTP01350 101 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 ZDHHC11BP0C7U3 371 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 RBP3P10745 1247 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 MTHFD2P13995 350 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 HDCP19113 662 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 ADORA2BP29275 332 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 HOXC13P31276 330 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 GPR3P46089 330 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 IFNAR2P48551 515 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 PGFP49763 221 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 PDE6CP51160 858 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 MAP3K7CLP57077 242 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 FKBP3Q00688 224 aaKnown RBP4.36□□□□□ -1.71
VTI1B-203ENST00000554636 SATB1Q01826 763 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 LRRC63Q05C16 580 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 DMWDQ09019 674 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 RUNX3Q13761 415 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 MORC3Q14149 939 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 PON2Q15165 354 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 TMEM196Q5HYL7 178 aa4.36□□□□□ -1.71
VTI1B-203ENST00000554636 ATXN7L2Q5T6C5 722 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms