RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	HES6	Q96HZ4	224 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ANKRD36BP1	Q96IX9	119 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF668	Q96K58	619 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	FAM84A	Q96KN4	292 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CAPZA3	Q96KX2	299 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PPM1M	Q96MI6	270 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	LRRC37B	Q96QE4	947 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PCDHB18P	Q96TA0	734 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PARD6B	Q9BYG5	372 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MTMR12	Q9C0I1	747 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PDZD7	Q9H5P4	517 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ASB7	Q9H672	318 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RPF1	Q9H9Y2	349 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	APOBEC3G	Q9HC16	384 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ACP6	Q9NPH0	428 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SETD4	Q9NVD3	440 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	DKK4	Q9UBT3	224 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	GTF3C4	Q9UKN8	822 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574		B9A039	149 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TSPAN1	O60635	241 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	DUSP11	O75319	330 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CSDE1	O75534	798 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CYP1A2	P05177	515 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TMEM191B	P0C7N4	346 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	C1QTNF9	P0C862	333 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	STAG3L1	P0CL83	205 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CXCL8	P10145	99 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	UNG	P13051	313 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	AKR1A1	P14550	325 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	NPPB	P16860	134 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TPH1	P17752	444 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MCM3	P25205	808 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CNTF	P26441	200 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MST1	P26927	711 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	HOXC8	P31273	242 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF132	P52740	706 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TFAM	Q00059	246 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLC5A9	Q2M3M2	681 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF385B	Q569K4	471 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TAF3	Q5VWG9	929 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SPOPL	Q6IQ16	392 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ACAD10	Q6JQN1	1059 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	C11orf63	Q6NUN7	778 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PPP1R2P3	Q6NXS1	205 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	WDR93	Q6P2C0	686 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TMEM270	Q6UE05	265 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TRIM72	Q6ZMU5	477 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PEX26	Q7Z412	305 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	GATAD2A	Q86YP4	633 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SYT12	Q8IV01	421 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	EFCAB13	Q8IY85	973 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	NME8	Q8N427	588 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MMGT1	Q8N4V1	131 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SPATA4	Q8NEY3	305 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ASB12	Q8WXK4	309 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RUBCN	Q92622	972 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ARHGEF26	Q96DR7	871 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	LRIG1	Q96JA1	1093 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PBK	Q96KB5	322 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PSMB7	Q99436	277 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ADPGK	Q9BRR6	497 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	XYLT2	Q9H1B5	865 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	UVRAG	Q9P2Y5	699 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ABT1	Q9ULW3	272 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	COG5	Q9UP83	839 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	C2CD2	Q9Y426	696 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	HS3ST4	Q9Y661	456 aa		4.91	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CEP350	Q5VT06	3117 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MIF4GD	A9UHW6	222 aa	Known RBP	4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	FCHO1	O14526	889 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	PCDH17	O14917	1159 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ATP8B1	O43520	1251 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	USP1	O94782	785 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	POLB	P06746	335 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ITGA2B	P08514	1039 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	RHOXF2B	P0C7M4	288 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MYBL1	P10243	752 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CYP2C9	P11712	490 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CYBA	P13498	195 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CTGF	P29279	349 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	AXL	P30530	894 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF134	P52741	427 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLURP1	P55000	103 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	LINC00310	P59036	64 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	LILRA4	P59901	499 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	MYL6	P60660	151 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	OSTN	P61366	133 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	YWHAE	P62258	255 aa	Known RBP	4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	TRPC3	Q13507	836 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	ZNF699	Q32M78	642 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	DCAF4L1	Q3SXM0	396 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	GLE1	Q53GS7	698 aa	Known RBP	4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	FBXO47	Q5MNV8	452 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	INTS11	Q5TA45	600 aa	Known RBP	4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	CACHD1	Q5VU97	1274 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	SLC27A1	Q6PCB7	646 aa		4.9	□□□□□ -1.62
PPP4R3A-204	ENST00000554574	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.9	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms