RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ELFN1P0C7U0 828 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 MYBL1P10243 752 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 PRKCIP41743 596 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 TMPRSS3P57727 454 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 AP1S1P61966 158 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 C19orf57Q0VDD7 668 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 ARL14Q8N4G2 192 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 OR6C4Q8NGE1 309 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 WDR36Q8NI36 951 aaKnown RBP18.87■□□□□ 0.61
CPSF2-203ENST00000554290 PCDH19Q8TAB3 1148 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 ZNF653Q96CK0 615 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 ECHDC3Q96DC8 303 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 CCDC97Q96F63 343 aaPredicted RBP18.87■□□□□ 0.61
CPSF2-203ENST00000554290 ZNF599Q96NL3 588 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 SYNDIG1Q9H7V2 258 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 CWC15Q9P013 229 aaKnown RBP18.87■□□□□ 0.61
CPSF2-203ENST00000554290 SIRPGQ9P1W8 387 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 SEPT3Q9UH03 358 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 GPR34Q9UPC5 381 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 PCDHGA8Q9Y5G5 932 aa18.87■□□□□ 0.61
CPSF2-203ENST00000554290 FASNP49327 2511 aaKnown RBP18.87■□□□□ 0.61
CPSF2-203ENST00000554290 CACNB4O00305 520 aaPredicted RBP18.86■□□□□ 0.61
CPSF2-203ENST00000554290 DDX3XO00571 662 aaKnown RBP eCLIP18.86■□□□□ 0.613e-12■■■■□ 21.2
CPSF2-203ENST00000554290 KLK10O43240 276 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 LRCH4O75427 683 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 RECQL5O94762 991 aaPredicted RBP18.86■□□□□ 0.61
CPSF2-203ENST00000554290 KELP23276 732 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 PCK1P35558 622 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 MLLT3P42568 568 aaPredicted RBP18.86■□□□□ 0.61
CPSF2-203ENST00000554290 SCNN1BP51168 640 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 LIPIQ6XZB0 460 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 NPWQ8N729 165 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 PSKH2Q96QS6 385 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 TRIM7Q9C029 511 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 TMEM63CQ9P1W3 806 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 MYO1AQ9UBC5 1043 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 DGKBQ9Y6T7 804 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 ASXL3Q9C0F0 2248 aa18.86■□□□□ 0.61
CPSF2-203ENST00000554290 CCDC187A0A096LP49 1063 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.85■□□□□ 0.61
CPSF2-203ENST00000554290 H3BRJ5 948 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 ARL4AP40617 200 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 DPYSQ14117 519 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 LBRQ14739 615 aaKnown RBP18.85■□□□□ 0.61
CPSF2-203ENST00000554290 TCEA2Q15560 299 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 BOLA3Q53S33 107 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 TMCO4Q5TGY1 634 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 FOXR1Q6PIV2 292 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 ARHGAP36Q6ZRI8 547 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 CYP4V2Q6ZWL3 525 aaPredicted RBP18.85■□□□□ 0.61
CPSF2-203ENST00000554290 DPPA4Q7L190 304 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 KYQ8NBH2 561 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 PLA2G15Q8NCC3 412 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 OR56A4Q8NGH8 313 aa18.85■□□□□ 0.61
CPSF2-203ENST00000554290 GFM1Q96RP9 751 aaKnown RBP18.85■□□□□ 0.61
CPSF2-203ENST00000554290 RBM15Q96T37 977 aaKnown RBP eCLIP18.85■□□□□ 0.61
CPSF2-203ENST00000554290 LOC400499M0QZD8 3231 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 A0A1W2PNU3 283 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-203ENST00000554290 A0A1W2PQ67 120 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 TMX2-CTNND1H3BSU7 103 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 PDE2AO00408 941 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-203ENST00000554290 NTN3O00634 580 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-203ENST00000554290 TRAFD1O14545 582 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-203ENST00000554290 HOXC4P09017 264 aaPredicted RBP18.84■□□□□ 0.61
CPSF2-203ENST00000554290 NFKBIAP25963 317 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
CPSF2-203ENST00000554290 ZNF165P49910 485 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 KIAA1024LP59773 190 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 SLC10A7Q0GE19 358 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 RALGDSQ12967 914 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 ZNF235Q14590 738 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 TMCO3Q6UWJ1 677 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 CCDC74AQ96AQ1 378 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 ISCUQ9H1K1 167 aa18.84■□□□□ 0.61
CPSF2-203ENST00000554290 A0A1B0GTH6 734 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 TNFRSF10CO14798 259 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 TNFSF15O95150 251 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 SERPINC1P01008 464 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 SKILP12757 684 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 TRIM23P36406 574 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 ACOX1Q15067 660 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 DPYSL2Q16555 572 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 E4F1Q66K89 784 aaPredicted RBP18.83■□□□□ 0.6
CPSF2-203ENST00000554290 BBS5Q8N3I7 341 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 SPOCK2Q92563 424 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 FUBP1Q96AE4 644 aaKnown RBP18.83■□□□□ 0.6
CPSF2-203ENST00000554290 PDXPQ96GD0 296 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 PRR11Q96HE9 360 aaPredicted RBP18.83■□□□□ 0.6
CPSF2-203ENST00000554290 NAP1L5Q96NT1 182 aaPredicted RBP18.83■□□□□ 0.6
CPSF2-203ENST00000554290 STRADBQ9C0K7 418 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 KCTD5Q9NXV2 234 aa18.83■□□□□ 0.6
CPSF2-203ENST00000554290 TMEM202A6NGA9 273 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 A8MX80 341 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 CDRT15L2A8MXV6 281 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 ERVH48-1M5A8F1 160 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 SOCS5O75159 536 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 PRB1P04280 392 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 CCL7P80098 99 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 RHDQ02161 417 aa18.82■□□□□ 0.6
CPSF2-203ENST00000554290 EIF3IQ13347 325 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms