RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TAF1AQ15573 450 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 UGP2Q16851 508 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 ZDHHC20Q5W0Z9 365 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 USP30Q70CQ3 517 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 ERN2Q76MJ5 926 aaKnown RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 PARS2Q7L3T8 475 aaKnown RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 GSPT2Q8IYD1 628 aaKnown RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 SPEM1Q8N4L4 309 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 BLOC1S5Q8TDH9 187 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 SCRN2Q96FV2 425 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 EBNA1BP2Q99848 306 aaKnown RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 FOXQ1Q9C009 403 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 PABPC3Q9H361 631 aaKnown RBP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 MTG2Q9H4K7 406 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 ARFGAP3Q9NP61 516 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 SYBUQ9NX95 663 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHMT2-210ENST00000553950 FZD4Q9ULV1 537 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 SOX13Q9UN79 622 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 SIT1Q9Y3P8 196 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 ZNF711Q9Y462 761 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 TCAF1Q9Y4C2 921 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 TEX264Q9Y6I9 313 aa14.57□□□□□ -0.08
SHMT2-210ENST00000553950 FAM237BA0A1B0GVD1 139 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 TCRBV21S2A2A0A5A6 115 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 H0Y858 1186 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 PSMD11O00231 422 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 AP1G1O43747 822 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 USP1O94782 785 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 POLBP06746 335 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 PDHA1P08559 390 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 MYBL2P10244 700 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 ADRB3P13945 408 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 VIPR1P32241 457 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 SLC8A1P32418 973 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 HADHAP40939 763 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 GRIA1P42261 906 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 PMS2P54278 862 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 RPS14P62263 151 aaKnown RBP14.56□□□□□ -0.08
SHMT2-210ENST00000553950 IHHQ14623 411 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 POU6F1Q14863 301 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 KCTD19Q17RG1 926 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-210ENST00000553950 SPANXN3Q5MJ09 141 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 FNBP1LQ5T0N5 605 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 FAM182AQ5T1J6 154 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 ZNF449Q6P9G9 518 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 Q6ZS52 159 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 MREGQ8N565 214 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 FBXO36Q8NEA4 188 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 TSTD1Q8NFU3 115 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 SIPA1Q96FS4 1042 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 OMDQ99983 421 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 CDC42EP4Q9H3Q1 356 aaKnown RBP14.56□□□□□ -0.08
SHMT2-210ENST00000553950 CD320Q9NPF0 282 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 ZDHHC4Q9NPG8 344 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 RAD18Q9NS91 495 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 KCTD5Q9NXV2 234 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 ZC3H7BQ9UGR2 993 aaKnown RBP14.56□□□□□ -0.08
SHMT2-210ENST00000553950 CHMP2BQ9UQN3 213 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 NCKAP1Q9Y2A7 1128 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 PKP3Q9Y446 797 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
SHMT2-210ENST00000553950 PLXNA2O75051 1894 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 DYNC1I1O14576 645 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 ABHD2P08910 425 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 STX2P32856 288 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 MMP12P39900 470 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 ELK3P41970 407 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 CCR3P51677 355 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 OLIG2Q13516 323 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 FRG1Q14331 258 aaKnown RBP14.55□□□□□ -0.08
SHMT2-210ENST00000553950 SKIDA1Q1XH10 827 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 KIAA1211LQ6NV74 962 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 PKN3Q6P5Z2 889 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 TRIM67Q6ZTA4 783 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 DPPA4Q7L190 304 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 TTC7BQ86TV6 843 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 TMPRSS6Q8IU80 811 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 PALM2Q8IXS6 379 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 FLCNQ8NFG4 579 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 STYXQ8WUJ0 223 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 SIGLEC10Q96LC7 697 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 NSMCE3Q96MG7 304 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 KIFC1Q9BW19 673 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 GPR63Q9BZJ6 419 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 CDH19Q9H159 772 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 ZFYVE1Q9HBF4 777 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 CD248Q9HCU0 757 aa14.55□□□□□ -0.08
SHMT2-210ENST00000553950 BCCIPQ9P287 314 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHMT2-210ENST00000553950 C1orf232A0A0U1RR37 186 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 NEMP1O14524 444 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 MID1O15344 667 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 AVILO75366 819 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 APBB3O95704 486 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 H2AFXP16104 143 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 COL9A1P20849 921 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 LPOP22079 712 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-210ENST00000553950 MSS51Q4VC12 460 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 CERCAMQ5T4B2 595 aa14.54□□□□□ -0.08
SHMT2-210ENST00000553950 TSTD2Q5T7W7 516 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms