RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 NT5MQ9NPB1 228 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ENTPD7Q9NQZ7 604 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SARDHQ9UL12 918 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC45A1Q9Y2W3 748 aa6.97□□□□□ -1.29
LINC-ROR-201ENST00000553704 ANKRD36A6QL64 1941 aa6.96□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZNF839A8K0R7 811 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 MRASO14807 208 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 UBDO15205 165 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 B3GAT3O94766 335 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CNTN5O94779 1100 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CHRNA1P02708 482 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 LTA4HP09960 611 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM163BP0C2L3 166 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM58BPP0C7Q3 252 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 ODC1P11926 461 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 UGT1A6P19224 532 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 DNAJB1P25685 340 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 LEPRP48357 1165 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PSMD8P48556 350 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC7A2P52569 658 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CDH13P55290 713 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC10A7Q0GE19 358 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 LAMB3Q13751 1172 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CYTH1Q15438 398 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 USP41Q3LFD5 358 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 MORN1Q5T089 497 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 C8orf82Q6P1X6 216 aaPredicted RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 FUNDC1Q8IVP5 155 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 HERC6Q8IVU3 1022 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CCDC117Q8IWD4 279 aaPredicted RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 RTL3Q8N8U3 475 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CATSPER1Q8NEC5 780 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZC3H15Q8WU90 426 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PTCD2Q8WV60 388 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 EME1Q96AY2 570 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 UBXN10Q96LJ8 280 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 TRIM8Q9BZR9 551 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 Q9H521 79 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 ATP13A1Q9HD20 1204 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 POLR3BQ9NW08 1133 aaPredicted RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 UTP6Q9NYH9 597 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PTTG2Q9NZH5 202 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 IPO11Q9UI26 975 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 GBF1Q92538 1859 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SCN10AQ9Y5Y9 1956 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 A0A1B0GTL3 188 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 A0A1W2PQH9 124 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 HEATR9A2RTY3 570 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CCDC160A6NGH7 325 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 TNFRSF10BO14763 440 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 FGF10O15520 208 aaPredicted RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 B4GALT3O60512 393 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 TIPRLO75663 272 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SIX3O95343 332 aaPredicted RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC4A1P02730 911 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PRSS56P0CW18 603 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CKMT2P17540 419 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PAMP19021 973 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CHRM3P20309 590 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CCR1P32246 355 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 POLD2P49005 469 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 GPR15P49685 360 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CPT1AP50416 773 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CLCN5P51795 746 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 FOXA1P55317 472 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CREB5Q02930 508 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 MAP2K5Q13163 448 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 IKBKEQ14164 716 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SEMA3AQ14563 771 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM83EQ2M2I3 478 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 UNC50Q53HI1 259 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 ALFQ53S48 1182 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 BRMS1LQ5PSV4 323 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CILP2Q8IUL8 1156 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 MYO1HQ8N1T3 1032 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 DGCR14Q96DF8 476 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 HMCESQ96FZ2 354 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 IMP4Q96G21 291 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF597Q96LX8 424 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PHF12Q96QT6 1004 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 KCNA7Q96RP8 456 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 PARK7Q99497 189 aaKnown RBP6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CIB1Q99828 191 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CATSPERBQ9H7T0 1116 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 CD300AQ9UGN4 299 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 DSEQ9UL01 958 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 AP4S1Q9Y587 144 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 TRPV2Q9Y5S1 764 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 SNX13Q9Y5W8 968 aa6.96□□□□□ -1.3
LINC-ROR-201ENST00000553704 TCRBV3S1A0A5B6 114 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 KLHL33A6NCF5 533 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SRP72O76094 671 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SUPT7LO94864 414 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ASLP04424 464 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC5A2P31639 672 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CYP2C18P33260 490 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 RGS2P41220 211 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SERPINH1P50454 418 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 TIAL1Q01085 375 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 RHDQ02161 417 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms