RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DARS2Q6PI48 645 aaKnown RBP16.22■□□□□ 0.19
ACTN1-209ENST00000553659 CENPUQ71F23 418 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 ZNF771Q7L3S4 317 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-209ENST00000553659 CCDC25Q86WR0 208 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 APCDD1Q8J025 514 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 LGI2Q8N0V4 545 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 AADATQ8N5Z0 425 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 ADAM32Q8TC27 787 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 SAP25Q8TEE9 199 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 PTPRN2Q92932 1015 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 RTP4Q96DX8 246 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 TMEM121Q9BTD3 319 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 EPB41L4BQ9H329 900 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 XPO7Q9UIA9 1087 aaKnown RBP16.22■□□□□ 0.19
ACTN1-209ENST00000553659 ASXL3Q9C0F0 2248 aa16.22■□□□□ 0.19
ACTN1-209ENST00000553659 HACD1B0YJ81 288 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 H3BRJ5 948 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 WNT9AO14904 365 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 TP73O15350 636 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 SHOX2O60902 331 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 MOCS2O96007 188 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 ADH1BP00325 375 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 IFNB1P01574 187 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 APOEP02649 317 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 JUPP14923 745 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 L1CAMP32004 1257 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 NNMTP40261 264 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 PSMD8P48556 350 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 VPS41P49754 854 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 ADPRHP54922 357 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 STAT4Q14765 748 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 ARL13BQ3SXY8 428 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 SLC45A4Q5BKX6 768 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 EFHC2Q5JST6 749 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 RNASEH2BQ5TBB1 312 aaKnown RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 TAC4Q86UU9 113 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 STK40Q8N2I9 435 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 RIBC1Q8N443 379 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 PLD5Q8N7P1 536 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 OR14C36Q8NHC7 312 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 SERAC1Q96JX3 654 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 CNDP2Q96KP4 475 aaKnown RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 BTN2A3PQ96KV6 586 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 RPL10LQ96L21 214 aaKnown RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 SERPINB12Q96P63 405 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 FAM118BQ9BPY3 351 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 CAPS2Q9BXY5 557 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 DHX35Q9H5Z1 703 aaKnown RBP16.21■□□□□ 0.19
ACTN1-209ENST00000553659 FZD10Q9ULW2 581 aa16.21■□□□□ 0.19
ACTN1-209ENST00000553659 ITPR1Q14643 2758 aa16.21■□□□□ 0.18
ACTN1-209ENST00000553659 H7C0C1 242 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 TLR4O00206 839 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 CBX4O00257 560 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 PLK4O00444 970 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 RASGRF2O14827 1237 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 RGS16O15492 202 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-209ENST00000553659 RFPL3O75679 317 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 TACR2P21452 398 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 IL4RP24394 825 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 HNF1BP35680 557 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 ATP5OP48047 213 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 ARRB1P49407 418 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-209ENST00000553659 ARL4CP56559 192 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 DEUP1Q05D60 604 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 CBLBQ13191 982 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 SLC12A1Q13621 1099 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 ZC3H12AQ5D1E8 599 aaKnown RBP16.2■□□□□ 0.18
ACTN1-209ENST00000553659 RAP1GAP2Q684P5 730 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 EID2Q8N6I1 236 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 BBC3Q96PG8 261 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-209ENST00000553659 RBM15Q96T37 977 aaKnown RBP eCLIP16.2■□□□□ 0.18
ACTN1-209ENST00000553659 CENPHQ9H3R5 247 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 ERVMER34-1Q9H9K5 563 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
ACTN1-209ENST00000553659 LAMA5O15230 3695 aa16.2■□□□□ 0.18
ACTN1-209ENST00000553659 TDRD6O60522 2096 aaKnown RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3DA0A087WVF3 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3IA0A087WXS9 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3EA0A087X179 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3KA0A087X1G2 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3FA6NER0 549 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3LB9A6J9 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 LATO43561 262 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 IL1BP01584 269 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 IGLV3-25P01717 112 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3HP0C7X1 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 PECAM1P16284 738 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 MZF1P28698 734 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 RXRGP48443 463 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 STK19P49842 368 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 PLK1P53350 603 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 GYS2P54840 703 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 NXPH1P58417 271 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 SULT2A1Q06520 285 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 DNAJC3Q13217 504 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 ELAVL3Q14576 367 aaKnown RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3GQ6DHY5 549 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3CQ6IPX1 549 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms