RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 BMPERQ8N8U9 685 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 AGBL5Q8NDL9 886 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 SSC4DQ8WTU2 575 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 RNF31Q96EP0 1072 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 HMCESQ96FZ2 354 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 EXOC2Q96KP1 924 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 CEP63Q96MT8 703 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 HAPLN3Q96S86 360 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 CTRCQ99895 268 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 TTYH3Q9C0H2 523 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 KLC2Q9H0B6 622 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
VPS29-211ENST00000553128 CYP4F12Q9HCS2 524 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 RRN3Q9NYV6 651 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
VPS29-211ENST00000553128 DKK3Q9UBP4 350 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 STAP1Q9ULZ2 295 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 NEU3Q9UQ49 428 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 ST14Q9Y5Y6 855 aa12.99□□□□□ -0.33
VPS29-211ENST00000553128 RHPN2P1A8MT19 583 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 FAM72CH0Y354 149 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 KRT38O76015 456 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 ECEL1O95672 775 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 FUCA1P04066 466 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 PDGFAP04085 211 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 THRAP10827 490 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 POU3F2P20265 443 aaPredicted RBP12.98□□□□□ -0.33
VPS29-211ENST00000553128 KIAA1024LP59773 190 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 MTM1Q13496 603 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 SLC25A52Q3SY17 297 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 C2CD6Q53TS8 623 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 FAM72AQ5TYM5 149 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 MANEALQ5VSG8 457 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 ISM2Q6H9L7 571 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 FAM72DQ6L9T8 149 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 BNIPLQ7Z465 357 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 FAM72BQ86X60 149 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 FAM129CQ86XR2 697 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 TRIM59Q8IWR1 403 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 NRSN1Q8IZ57 195 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 NLGN4XQ8N0W4 816 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 TEX19Q8NA77 164 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 NLGN4YQ8NFZ3 816 aaPredicted RBP12.98□□□□□ -0.33
VPS29-211ENST00000553128 ATL2Q8NHH9 583 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 ZDHHC1Q8WTX9 485 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
VPS29-211ENST00000553128 STARD8Q92502 1023 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 CFAP57Q96MR6 1250 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 GDAP1L1Q96MZ0 367 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 SYNCQ9H7C4 482 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
VPS29-211ENST00000553128 AJAP1Q9UKB5 411 aaPredicted RBP12.98□□□□□ -0.33
VPS29-211ENST00000553128 ARHGEF17Q96PE2 2063 aaPredicted RBP12.98□□□□□ -0.33
VPS29-211ENST00000553128 ABCA12Q86UK0 2595 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 CXorf51AA0A1B0GTR3 108 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 PPM1DO15297 605 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 CAPN5O15484 640 aaPredicted RBP12.97□□□□□ -0.33
VPS29-211ENST00000553128 VPS4BO75351 444 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 F9P00740 461 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 PNMA6AP0CW24 399 aaPredicted RBP12.97□□□□□ -0.33
VPS29-211ENST00000553128 GM2AP17900 193 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 BMP6P22004 513 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 XPAP23025 273 aaPredicted RBP12.97□□□□□ -0.33
VPS29-211ENST00000553128 F8A1P23610 371 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 AK4P27144 223 aaPredicted RBP12.97□□□□□ -0.33
VPS29-211ENST00000553128 CSTF2P33240 577 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS29-211ENST00000553128 MMP12P39900 470 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 ELP6Q0PNE2 266 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 AGERQ15109 404 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 UGP2Q16851 508 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 DCAF12Q5T6F0 453 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 RWDD4Q6NW29 188 aaKnown RBP12.97□□□□□ -0.33
VPS29-211ENST00000553128 TTI2Q6NXR4 508 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 OR4D9Q8NGE8 314 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 CRACR2AQ9BSW2 395 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 ASPSCR1Q9BZE9 553 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 APMAPQ9HDC9 416 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 VPS4AQ9UN37 437 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 MFHAS1Q9Y4C4 1052 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 KCNMB2Q9Y691 235 aa12.97□□□□□ -0.33
VPS29-211ENST00000553128 IGHV1OR21-1A0A087WYE8 117 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 PRSS38A1L453 326 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 B4E171 279 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 CACNB4O00305 520 aaPredicted RBP12.96□□□□□ -0.33
VPS29-211ENST00000553128 BUB1O43683 1085 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 KDELR3O43731 214 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 BUB1BO60566 1050 aaPredicted RBP12.96□□□□□ -0.33
VPS29-211ENST00000553128 RECQL5O94762 991 aaPredicted RBP12.96□□□□□ -0.33
VPS29-211ENST00000553128 IGSF6O95976 241 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 FURINP09958 794 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 CCNB1P14635 433 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 SLC9A1P19634 815 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 DCTP40126 519 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 TSPAN7P41732 249 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 GEMIN4P57678 1058 aaKnown RBP12.96□□□□□ -0.33
VPS29-211ENST00000553128 RHOAP61586 193 aa12.96□□□□□ -0.33
VPS29-211ENST00000553128 TRA2AQ13595 282 aaKnown RBP eCLIP12.96□□□□□ -0.33
VPS29-211ENST00000553128 FAM102AQ5T9C2 384 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms