RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ACSM2AQ08AH3 577 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 KLF10Q13118 480 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 IL11RAQ14626 422 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 KRBOX4Q5JUW0 171 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 C6orf141Q5SZD1 244 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 RARS2Q5T160 578 aaKnown RBP4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 LRIF1Q5T3J3 769 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 ACSM2BQ68CK6 577 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 HIST2H2BCQ6DN03 193 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 PLEKHA7Q6IQ23 1121 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 AAGABQ6PD74 315 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 TRAT1Q6PIZ9 186 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 SUSD1Q6UWL2 747 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 TMC8Q8IU68 726 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 MCEMP1Q8IX19 187 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 HACE1Q8IYU2 909 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 FAM185AQ8N0U4 392 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 XXYLT1Q8NBI6 393 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 RASSF8Q8NHQ8 419 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 DEPDC1BQ8WUY9 529 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 KAT2BQ92831 832 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC41A2Q96JW4 573 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 RITA1Q96K30 269 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 FER1L6-AS2Q96M78 137 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 SLITRK1Q96PX8 696 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 MXRA8Q9BRK3 442 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 HGH1Q9BTY7 390 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 MRPL9Q9BYD2 267 aaKnown RBP4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 MAGEE1Q9HCI5 957 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 TUBE1Q9UJT0 475 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 MAFFQ9ULX9 164 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 PPIEQ9UNP9 301 aaKnown RBP4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 WBP11Q9Y2W2 641 aaKnown RBP4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 A3GALT2U3KPV4 340 aa4.17□□□□□ -1.74
LSM6P2-201ENST00000552208 TRBC2A0A5B9 178 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 LNP1A1A4G5 178 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 TARM1B6A8C7 271 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 K7ESM1 405 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 CHL1O00533 1208 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 PRRG2O14669 202 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 MGST3O14880 152 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 KIF1CO43896 1103 aaKnown RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 DAB1O75553 588 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 NFATC1O95644 943 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ATP5BP06576 529 aaKnown RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 PCNAP12004 261 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ACTN1P12814 892 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 C6P13671 934 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 MMP9P14780 707 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 TACR3P29371 465 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ATP5DP30049 168 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 CCR3P51677 355 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 TFAP4Q01664 338 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 NAB2Q15742 525 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ASIC2Q16515 512 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 TCTN1Q2MV58 587 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 PLEKHO1Q53GL0 409 aaPredicted RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF805Q5CZA5 627 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 MIIPQ5JXC2 388 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 FBXO46Q6PJ61 603 aaPredicted RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 LCTLQ6UWM7 567 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 CCDC25Q86WR0 208 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 VRK3Q8IV63 474 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 WDR63Q8IWG1 891 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC35F3Q8IY50 421 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ZDHHC23Q8IYP9 409 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 GJC3Q8NFK1 279 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 BCAS4Q8TDM0 211 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC9A6Q92581 669 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ATOH1Q92858 354 aaPredicted RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 IGSF8Q969P0 613 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 ARSGQ96EG1 525 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 FAM110AQ9BQ89 295 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 PIMREGQ9BSJ6 248 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 NAA11Q9BSU3 229 aaPredicted RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 CCDC106Q9BWC9 280 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 IFIH1Q9BYX4 1025 aaKnown RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 GPR88Q9GZN0 384 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 TRPV4Q9HBA0 871 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 DDX4Q9NQI0 724 aaKnown RBP4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 SMPD4Q9NXE4 827 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 SERGEFQ9UGK8 458 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 NDRG3Q9UGV2 375 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 RASAL2Q9UJF2 1139 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 SNX5Q9Y5X3 404 aa4.16□□□□□ -1.74
LSM6P2-201ENST00000552208 C17orf102A2RUQ5 167 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 LRRC72A6NJI9 287 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 UBE2Q2LH0YL09 131 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 INPPL1O15357 1258 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 PLRG1O43660 514 aaKnown RBP4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 JRKO75564 520 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 RECQL5O94762 991 aaPredicted RBP4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 BAG2O95816 211 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 TOP3BO95985 862 aaKnown RBP4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 HSP90AB1P08238 724 aaKnown RBP4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 CD63P08962 238 aa4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 NHLRC4P0CG21 123 aaPredicted RBP4.15□□□□□ -1.75
LSM6P2-201ENST00000552208 UNGP13051 313 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms