RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TUBGCP2Q9BSJ2 902 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 NAA15Q9BXJ9 866 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 STK33Q9BYT3 514 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 SLC25A18Q9H1K4 315 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 DPEP2Q9H4A9 486 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 GEMIN8Q9NWZ8 242 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 LHX3Q9UBR4 397 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 SEPT3Q9UH03 358 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 ATP8A1Q9Y2Q0 1164 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 CFAP69A5D8W1 941 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 C9orf172C9J069 976 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 RASA4BC9J798 803 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 STMND1H3BQB6 276 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 TNFRSF10CO14798 259 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 RASA4O43374 803 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 GADD45BO75293 160 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 CPNE6O95741 557 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 ETV5P41161 510 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 ATP1A2P50993 1020 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 HDAC4P56524 1084 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 SRSF1Q07955 248 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 SERINC3Q13530 473 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 HLTFQ14527 1009 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 TSR1Q2NL82 804 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 MIIPQ5JXC2 388 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 COLEC12Q5KU26 742 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 SPECC1LQ69YQ0 1117 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 PHLDB2Q86SQ0 1253 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 PIM3Q86V86 326 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 OR1E3Q8WZA6 343 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 TUBGCP5Q96RT8 1024 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 C11orf70Q9BRQ4 267 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 MAGEB5Q9BZ81 275 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 KLC2Q9H0B6 622 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 ADNPQ9H2P0 1102 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 NOL6Q9H6R4 1146 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 CATSPERBQ9H7T0 1116 aa14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 UBA2Q9UBT2 640 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-210ENST00000551981 DOPEY2Q9Y3R5 2298 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 TMEM202A6NGA9 273 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 CYP1A1P04798 512 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 HOXC4P09017 264 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 KRT3P12035 628 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 SERPINA4P29622 427 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 CYP4F2P78329 520 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 CDR2Q01850 454 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 CYTH1Q15438 398 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 CAMK4Q16566 473 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 CLPPQ16740 277 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 NYAP1Q6ZVC0 841 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 UMODL1-AS1Q8N2C9 162 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 PAF1Q8N7H5 531 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 PLA2G15Q8NCC3 412 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 SLC20A1Q8WUM9 679 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 FUBP1Q96AE4 644 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 TMEM168Q9H0V1 697 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 SEMA6CQ9H3T2 930 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 ATP13A3Q9H7F0 1226 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 FGF22Q9HCT0 170 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 DONSONQ9NYP3 566 aa14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 NOCTQ9UK39 431 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 ARHGEF17Q96PE2 2063 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-210ENST00000551981 RHPN2P1A8MT19 583 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 PDE2AO00408 941 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 HGSO14964 777 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 FGF10O15520 208 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 CREB3O43889 395 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 ELFN1P0C7U0 828 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 GPD1P21695 349 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 NSFP46459 744 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 POLR2LP62875 67 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 TLE1Q04724 770 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 CLCA4Q14CN2 919 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 C16orf72Q14CZ0 275 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 AMZ1Q400G9 498 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 KCTD16Q68DU8 428 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 BORAQ6PGQ7 559 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 TRIM72Q6ZMU5 477 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 CAMK1DQ8IU85 385 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 PYROXD2Q8N2H3 581 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 CCDC112Q8NEF3 446 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 SLC30A5Q8TAD4 765 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 HTR3CQ8WXA8 447 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 FUCA2Q9BTY2 467 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 SELENOOQ9BVL4 669 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 WDR26Q9H7D7 661 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 CYP4F12Q9HCS2 524 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 MRPL40Q9NQ50 206 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
CHMP1A-210ENST00000551981 SDK2Q58EX2 2172 aa14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 ANKRD62A6NC57 917 aa14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 WASH4PA8MWX3 477 aa14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 BUB1BO60566 1050 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 RECQL5O94762 991 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 GFPT2O94808 682 aa14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 WT1P19544 449 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 RFC1P35251 1148 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-210ENST00000551981 STAT1P42224 750 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms