RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MFHAS1Q9Y4C4 1052 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 HS3ST3A1Q9Y663 406 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 RELNP78509 3460 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 LRRK1Q38SD2 2015 aa6.92□□□□□ -1.3
PRPF40B-214ENST00000551320 UNC13CQ8NB66 2214 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 EME2A4GXA9 379 aaPredicted RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 J3KR12 359 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 CREB3O43889 395 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 NOBOXO60393 691 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RPLP0P05388 317 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ANXA6P08133 673 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 PLEKP08567 350 aaPredicted RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RBMS1P29558 406 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 SLC5A2P31639 672 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RFC1P35251 1148 aaPredicted RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RABIFP47224 123 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 GABRB2P47870 512 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 HDAC4P56524 1084 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 FMO1Q01740 532 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 INPP5AQ14642 412 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 CYTH1Q15438 398 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 DBN1Q16643 649 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 CA9Q16790 459 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 LINC00303Q3SY05 128 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF805Q5CZA5 627 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 MANEALQ5VSG8 457 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 BROXQ5VW32 411 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RETSATQ6NUM9 610 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ZCCHC8Q6NZY4 707 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 NEK5Q6P3R8 708 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 GDPD4Q6W3E5 623 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RBM44Q6ZP01 1051 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 USP53Q70EK8 1073 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ENOSF1Q7L5Y1 443 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 BNIPLQ7Z465 357 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 NLRP8Q86W28 1048 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ATCAYQ86WG3 371 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 CAMK1DQ8IU85 385 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 PCDH20Q8N6Y1 951 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF397Q8NF99 534 aaPredicted RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM172AQ8WUF8 416 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 PATE1Q8WXA2 126 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 OR1E3Q8WZA6 343 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 PDXPQ96GD0 296 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 CCDC114Q96M63 670 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 BOCQ9BWV1 1114 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 LGR4Q9BXB1 951 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 NAA15Q9BXJ9 866 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 CPEB1Q9BZB8 566 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 GANQ9H2C0 597 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 RDH14Q9HBH5 336 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 FAM207AQ9NSI2 230 aaPredicted RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 FOXJ2Q9P0K8 574 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 LHX3Q9UBR4 397 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 PISDQ9UG56 409 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 MOSPD1Q9UJG1 213 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 NOCTQ9UK39 431 aaKnown RBP6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 STAP1Q9ULZ2 295 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 GPR34Q9UPC5 381 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 PLEKHM1Q9Y4G2 1056 aa6.91□□□□□ -1.3
PRPF40B-214ENST00000551320 ANKRD36A6QL64 1941 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 ZFC3H1O60293 1989 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TRBV23OR9-2A0A075B6M9 112 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PRAMEF33A0A0G2JMD5 474 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 NEMP2A6NFY4 417 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TMEM202A6NGA9 273 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 B4DGG1 531 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 F8VZ95 297 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 K7ENP7 123 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 AREL1O15033 823 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PRAMEF10O60809 474 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 CDK4P11802 303 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 C6P13671 934 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 UCHL3P15374 230 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 TNFAIP3P21580 790 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 CDH5P33151 784 aaPredicted RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 UGT1A5P35504 534 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 MAPK10P53779 464 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 MAZP56270 477 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 POLR2FP61218 127 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 RHOAP61586 193 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 RPL7AP62424 266 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 OGDHQ02218 1023 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PPARDQ03181 441 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 PTP4A2Q12974 167 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 SPIDRQ14159 915 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 LBRQ14739 615 aaKnown RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 POLD3Q15054 466 aaPredicted RBP6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 MEA1Q16626 185 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 MAN2A1Q16706 1144 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 AMZ1Q400G9 498 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 NKAIN2Q5VXU1 208 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 DENND2CQ68D51 928 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 ZNF787Q6DD87 383 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 KIAA1161Q6NSJ0 714 aa6.9□□□□□ -1.3
PRPF40B-214ENST00000551320 INO80CQ6PI98 192 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms