RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 A0A0U1RQS6 177 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 C3orf70A6NLC5 250 aaPredicted RBP13.09□□□□□ -0.31
NPAS3-209ENST00000551008 A8MX80 341 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 RECQL5O94762 991 aaPredicted RBP13.09□□□□□ -0.31
NPAS3-209ENST00000551008 H2AFZP0C0S5 128 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 TMEM253P0C7T8 217 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 LHCGRP22888 699 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 MAN1A1P33908 653 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 GBE1Q04446 702 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 CYP4F3Q08477 520 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPAS3-209ENST00000551008 INPP5AQ14642 412 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 LRRC14Q15048 493 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 CNGA3Q16281 694 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 DEFB133Q30KQ1 61 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 CDCP2Q5VXM1 449 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 ALG1LQ6GMV1 187 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 GUSBP11Q6P575 273 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 H2AFVQ71UI9 128 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 DCBLD1Q8N8Z6 715 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 LMX1AQ8TE12 382 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 TSACCQ96A04 125 aaPredicted RBP13.09□□□□□ -0.31
NPAS3-209ENST00000551008 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 TBATAQ96M53 351 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 APOOQ9BUR5 198 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 APOBEC3BQ9UH17 382 aaKnown RBP13.09□□□□□ -0.31
NPAS3-209ENST00000551008 OR1A2Q9Y585 309 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 UNC13CQ8NB66 2214 aa13.09□□□□□ -0.31
NPAS3-209ENST00000551008 CFAP69A5D8W1 941 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 SOCS5O75159 536 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 MTA2O94776 668 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 PCCBP05166 539 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 TSHRP16473 764 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 XPAP23025 273 aaPredicted RBP13.08□□□□□ -0.32
NPAS3-209ENST00000551008 SERPINB6P35237 376 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 HSPA9P38646 679 aaKnown RBP13.08□□□□□ -0.32
NPAS3-209ENST00000551008 GARSP41250 739 aaKnown RBP13.08□□□□□ -0.32
NPAS3-209ENST00000551008 MMP13P45452 471 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 RENBPP51606 427 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 THOP1P52888 689 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 MTM1Q13496 603 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 KRT81Q14533 505 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 ZNF235Q14590 738 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 NFATC4Q14934 902 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 ANKRD20A8PQ5CZ79 823 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 SLC35F3Q8IY50 421 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 CACTIN-AS1Q8N1I8 211 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
NPAS3-209ENST00000551008 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.32
NPAS3-209ENST00000551008 OR1E3Q8WZA6 343 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 BOCQ9BWV1 1114 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 C1QTNF7Q9BXJ2 289 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 NHEJ1Q9H9Q4 299 aaPredicted RBP13.08□□□□□ -0.32
NPAS3-209ENST00000551008 FGF22Q9HCT0 170 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 RAXQ9Y2V3 346 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 GPSM3Q9Y4H4 160 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
NPAS3-209ENST00000551008 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 A0A1W2PNU3 283 aaPredicted RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TMEM202A6NGA9 273 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 NPIPB15A6NHN6 443 aaPredicted RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TMEM110-MUSTN1A8MSY1 372 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 LMO7DNF2Z398 122 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 H3BM21 787 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TOR1BO14657 336 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TPP1O14773 563 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 LZTS3O60299 673 aaPredicted RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 OPA1O60313 960 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 FZD6O60353 706 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PGLSO95336 258 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 CPP00450 1065 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TPM3P06753 285 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PDHA1P08559 390 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 CDK4P11802 303 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 JUPP14923 745 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PEX5P50542 639 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 HK3P52790 923 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 DAB2P98082 770 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 RTP5Q14D33 572 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TCEA2Q15560 299 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 CDKN3Q16667 212 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PERM1Q5SV97 790 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 CFAP58Q5T655 872 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
NPAS3-209ENST00000551008 SARM1Q6SZW1 724 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 RFLNAQ6ZTI6 216 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 HSD11B1LQ7Z5J1 315 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TSPAN33Q86UF1 283 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 PLD5Q8N7P1 536 aa13.07□□□□□ -0.32
NPAS3-209ENST00000551008 TC2NQ8N9U0 490 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms