RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 HNRNPLLQ8WVV9 542 aaKnown RBP12.2□□□□□ -0.46
ERBB3-216ENST00000550869 SERPINB12Q96P63 405 aa12.2□□□□□ -0.46
ERBB3-216ENST00000550869 TUBGCP5Q96RT8 1024 aa12.2□□□□□ -0.46
ERBB3-216ENST00000550869 NUSAP1Q9BXS6 441 aaKnown RBP12.2□□□□□ -0.46
ERBB3-216ENST00000550869 LRRC40Q9H9A6 602 aa12.2□□□□□ -0.46
ERBB3-216ENST00000550869 GOLGA6AQ9NYA3 693 aa12.2□□□□□ -0.46
ERBB3-216ENST00000550869 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
ERBB3-216ENST00000550869 PLA2G4CQ9UP65 541 aa12.2□□□□□ -0.46
ERBB3-216ENST00000550869 INVSQ9Y283 1065 aa12.2□□□□□ -0.46
ERBB3-216ENST00000550869 TTC34A8MYJ7 566 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■□□□ 14.2
ERBB3-216ENST00000550869 ADAM23O75077 832 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 POP4O95707 220 aaKnown RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 IGSF6O95976 241 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 PROS1P07225 676 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 FAM153BP0C7A2 387 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 ITKQ08881 620 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 GRM3Q14832 879 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 HNRNPA1L2Q32P51 320 aaKnown RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 FAM153CQ494X1 144 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 ATXN7L2Q5T6C5 722 aaPredicted RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 C9orf64Q5T6V5 341 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 EMC10Q5UCC4 262 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 PEAR1Q5VY43 1037 aaPredicted RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 ARMC3Q5W041 872 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 NAPEPLDQ6IQ20 393 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 SLC36A4Q6YBV0 504 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 PPP1R21Q6ZMI0 780 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 DPY19L3Q6ZPD9 716 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 RABEPKQ7Z6M1 372 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 LINC00523Q86TU6 105 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 AGGF1Q8N302 714 aaeCLIP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 ZNF513Q8N8E2 541 aaPredicted RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 HMGB4Q8WW32 186 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 PIGKQ92643 395 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 CAVIN3Q969G5 261 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 ECHDC3Q96DC8 303 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 FEM1CQ96JP0 617 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 EXOC2Q96KP1 924 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 GDAP1L1Q96MZ0 367 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 PWWP2AQ96N64 755 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 FMO2Q99518 471 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 TDRD1Q9BXT4 1180 aaKnown RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 TM6SF2Q9BZW4 377 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 TSPYL1Q9H0U9 437 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 XAB2Q9HCS7 855 aaKnown RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 UBP1Q9NZI7 540 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 MTRF1LQ9UGC7 380 aaKnown RBP12.19□□□□□ -0.46
ERBB3-216ENST00000550869 TTLL3Q9Y4R7 772 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 PI4KAP42356 2102 aa12.19□□□□□ -0.46
ERBB3-216ENST00000550869 SPEGQ15772 3267 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 TCRBV21S2A2A0A5A6 115 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 E7EVH7 732 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 F5H423 210 aaPredicted RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 AP3B1O00203 1094 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 ALOX15BO15296 676 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SOCS5O75159 536 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 PMPCBO75439 489 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 ATXN1LP0C7T5 689 aaKnown RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 IL12RB1P42701 662 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 CCNHP51946 323 aaPredicted RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 ST8SIA6P61647 398 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 IRX4P78413 519 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SARNPP82979 210 aaKnown RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 CDK18Q07002 472 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 TRAF2Q12933 501 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 OLIG2Q13516 323 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SPARCL1Q14515 664 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 MAP7D1Q3KQU3 841 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 MSS51Q4VC12 460 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 FNBP1LQ5T0N5 605 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 LYSMD4Q5XG99 296 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 EMBQ6PCB8 327 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SLC23A3Q6PIS1 610 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 Q6ZVU0 165 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 GSPT2Q8IYD1 628 aaKnown RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 HCAR2Q8TDS4 363 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 LRIG1Q96JA1 1093 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SIGLEC10Q96LC7 697 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 ACOX2Q99424 681 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 GABRG3Q99928 467 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 TBL1YQ9BQ87 522 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 WDR83Q9BRX9 315 aaKnown RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 TNKS2Q9H2K2 1166 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SLC32A1Q9H598 525 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 HECAQ9UBI9 543 aaPredicted RBP12.18□□□□□ -0.46
ERBB3-216ENST00000550869 SUN2Q9UH99 717 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 RAI2Q9Y5P3 530 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
ERBB3-216ENST00000550869 EDDM13A0A1B0GTR0 161 aa12.17□□□□□ -0.46
ERBB3-216ENST00000550869 TMEM8BA6NDV4 472 aa12.17□□□□□ -0.46
ERBB3-216ENST00000550869 UPK3BL1B0FP48 263 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms