RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 PCCBP05166 539 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 DESP17661 470 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 RALGDSQ12967 914 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 CA9Q16790 459 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 AFMIDQ63HM1 303 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 APTXQ7Z2E3 356 aaKnown RBP21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 PDXPQ96GD0 296 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 EIF3CQ99613 913 aaKnown RBP21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 SYT11Q9BT88 431 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 ATP13A3Q9H7F0 1226 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 TAS2R14Q9NYV8 317 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 PCDHGA7Q9Y5G6 932 aa21.82■■□□□ 1.08
SMARCC2-210ENST00000550519 PALMO75781 387 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 RECQL5O94762 991 aaPredicted RBP21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 RPLP0P05388 317 aaKnown RBP21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 FERP16591 822 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 SERPINA4P29622 427 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 CCKBRP32239 447 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 UGT1A5P35504 534 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 KIAA1024LP59773 190 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 MYL5Q02045 173 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 MAMLD1Q13495 774 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 LY6DQ14210 128 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 OGFOD3Q6PK18 319 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 LIPIQ6XZB0 460 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 CCDC81Q6ZN84 652 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 RAB11FIP2Q7L804 512 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 IRF2BP2Q7Z5L9 587 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 ARHGAP12Q8IWW6 846 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 FBXO39Q8N4B4 442 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 ARFGAP1Q8N6T3 406 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 OR1E3Q8WZA6 343 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 FOXP3Q9BZS1 431 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 LRRN3Q9H3W5 708 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 DHX35Q9H5Z1 703 aaKnown RBP21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 EPB41L5Q9HCM4 733 aa21.81■■□□□ 1.08
SMARCC2-210ENST00000550519 LRRK1Q38SD2 2015 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 AHCTF1Q8WYP5 2266 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 TMEM202A6NGA9 273 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 EEF2KO00418 725 aaKnown RBP21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 HOXC4P09017 264 aaPredicted RBP21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 CCDC172P0C7W6 258 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 TRIM23P36406 574 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 INHBCP55103 352 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 NSUN2Q08J23 767 aaKnown RBP eCLIP21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 ERMARDQ5T6L9 678 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 PLEKHA7Q6IQ23 1121 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 OR56A4Q8NGH8 313 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 FUBP1Q96AE4 644 aaKnown RBP21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 CCNL2Q96S94 520 aaPredicted RBP21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 STRADBQ9C0K7 418 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 HSD3B7Q9H2F3 369 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 FGF22Q9HCT0 170 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 APPL1Q9UKG1 709 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 ACSL6Q9UKU0 697 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 TENM4Q6N022 2769 aa21.8■■□□□ 1.08
SMARCC2-210ENST00000550519 J3QKU1 62 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 TRAFD1O14545 582 aaPredicted RBP21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 TNFRSF10CO14798 259 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 EFSO43281 561 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 GM2AP17900 193 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 PSMA2P25787 234 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 SLC5A2P31639 672 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 BCL2L1Q07817 233 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 CERCAMQ5T4B2 595 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 KIAA1614Q5VZ46 1190 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 RFX8Q6ZV50 586 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 CCNJLQ8IV13 435 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 TMEM74Q96NL1 305 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 PEBP4Q96S96 227 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 KCTD15Q96SI1 283 aaPredicted RBP21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 SNRNP25Q9BV90 132 aaKnown RBP21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 CINPQ9BW66 212 aaPredicted RBP21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 PARVAQ9NVD7 372 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 ANO10Q9NW15 660 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 ATXN7L1Q9ULK2 861 aaPredicted RBP21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 PIEZO2Q9H5I5 2752 aa21.79■■□□□ 1.08
SMARCC2-210ENST00000550519 LRP4O75096 1905 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 CACNB4O00305 520 aaPredicted RBP21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 NOBOXO60393 691 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 ELFN1P0C7U0 828 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 PNLIPP16233 465 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 GLB1P16278 677 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 ERCC2P18074 760 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 CDK11BP21127 795 aaKnown RBP21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 KELP23276 732 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 POLR2LP62875 67 aaKnown RBP21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 RFTN1Q14699 578 aaPredicted RBP21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 NCAPHQ15003 741 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 ZSCAN23Q3MJ62 389 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 PPP1R2P3Q6NXS1 205 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 ARHGAP36Q6ZRI8 547 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 CYP4V2Q6ZWL3 525 aaPredicted RBP21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 DPPA4Q7L190 304 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 TAF8Q7Z7C8 310 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 NPWQ8N729 165 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 MED8Q96G25 268 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 NSMCE3Q96MG7 304 aa21.78■■□□□ 1.08
SMARCC2-210ENST00000550519 MRPL40Q9NQ50 206 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms