RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TCRBV5S1A1TA0A578 114 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 LGALS16A8MUM7 142 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 D6RAR5 112 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 J3KR12 359 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 RNF8O76064 485 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 ELFN1P0C7U0 828 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 PNLIPP16233 465 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 GLB1P16278 677 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 CCKBRP32239 447 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 RENBPP51606 427 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 NSUN2Q08J23 767 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 ARHGEF7Q14155 803 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 TCEA2Q15560 299 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 TSR1Q2NL82 804 aaKnown RBP23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 ERMARDQ5T6L9 678 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 MCOLN2Q8IZK6 566 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 FAM46DQ8NEK8 389 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 MED8Q96G25 268 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 CELF6Q96J87 481 aaKnown RBP23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 RBM15Q96T37 977 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 DHX35Q9H5Z1 703 aaKnown RBP23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 PDFQ9HBH1 243 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 ANO10Q9NW15 660 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 KCTD5Q9NXV2 234 aa23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 LIMA1Q9UHB6 759 aaKnown RBP23.21■■□□□ 1.31
SMARCD1-209ENST00000550477 B8ZZF3 427 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 TNFRSF10CO14798 259 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 PSMA2P25787 234 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 SLC5A2P31639 672 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 UGT1A5P35504 534 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 PAPOLAP51003 745 aaKnown RBP23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 ZNF135P52742 658 aaPredicted RBP23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 KIAA1024LP59773 190 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 CLN3Q13286 438 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 LY6DQ14210 128 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 CCNJLQ8IV13 435 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 ERGIC2Q96RQ1 377 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 AKAP7Q9P0M2 348 aaPredicted RBP23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 APPL1Q9UKG1 709 aa23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 ATXN7L1Q9ULK2 861 aaPredicted RBP23.2■■□□□ 1.3
SMARCD1-209ENST00000550477 A0A1W2PQ67 120 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 BUB1BO60566 1050 aaPredicted RBP23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 RECQL5O94762 991 aaPredicted RBP23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 HOXC4P09017 264 aaPredicted RBP23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 PDX1P52945 283 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 MYL5Q02045 173 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 PPP1R15BQ5SWA1 713 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 XKR5Q6UX68 686 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 TSEN2Q8NCE0 465 aaKnown RBP23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 GPR156Q8NFN8 814 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 KIAA1524Q8TCG1 905 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 CMKLR1Q99788 373 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 SLC39A8Q9C0K1 460 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 DPEP2Q9H4A9 486 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 MOSPD1Q9UJG1 213 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 LRRK1Q38SD2 2015 aa23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 COL27A1Q8IZC6 1860 aaPredicted RBP23.19■■□□□ 1.3
SMARCD1-209ENST00000550477 LRRC10BA6NIK2 292 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 KIAA1614Q5VZ46 1190 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 OGFOD3Q6PK18 319 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 LIPIQ6XZB0 460 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 USP53Q70EK8 1073 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 B3GNT8Q7Z7M8 397 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 Q8N9G6 341 aaPredicted RBP23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 FOXP3Q9BZS1 431 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 RABGEF1Q9UJ41 708 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 PCDHB11Q9Y5F2 797 aa23.18■■□□□ 1.3
SMARCD1-209ENST00000550477 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 A0A1W2PQM1 296 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 DFFAO00273 331 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 NVLO15381 856 aaKnown RBP23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 PRPSAP2O60256 369 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 SCNN1BP51168 640 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 AP1S1P61966 158 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 IL10RBQ08334 325 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 PEX6Q13608 980 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 BBS5Q8N3I7 341 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 LZTR1Q8N653 840 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 FUBP1Q96AE4 644 aaKnown RBP23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 PDXPQ96GD0 296 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 ARHGAP9Q9BRR9 750 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 WDR26Q9H7D7 661 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 GPATCH2LQ9NWQ4 482 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 LRIT1Q9P2V4 623 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 PISDQ9UG56 409 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 SEPT3Q9UH03 358 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 PCSK1NQ9UHG2 260 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 ACSL6Q9UKU0 697 aa23.17■■□□□ 1.3
SMARCD1-209ENST00000550477 PMS2P1A4D2B8 440 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 PRKCGP05129 697 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 TRIM23P36406 574 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 BIRC2Q13490 618 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 MAMLD1Q13495 774 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 ACOX1Q15067 660 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 C14orf28Q4W4Y0 310 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 CERCAMQ5T4B2 595 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 TMCO4Q5TGY1 634 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 TMEM164Q5U3C3 297 aa23.16■■□□□ 1.3
SMARCD1-209ENST00000550477 RFX8Q6ZV50 586 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms