RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 RAD54BQ9Y620 910 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 FLT1P17948 1338 aa3.4□□□□□ -1.87
CCNT1-203ENST00000550457 ROBO3Q96MS0 1386 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 MYH8P13535 1937 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SIPA1L3O60292 1781 aaPredicted RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CYP2D7A0A087X1C5 515 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 A0A1W2PRG0 241 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ESYT2A0FGR8 921 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ANKRD62A6NC57 917 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 MYMKA6NI61 221 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 A8MUI8 341 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ERVV-2B6SEH9 535 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 UBE2Q2LH0YL09 131 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CAPN9O14815 690 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 GYG2O15488 501 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 THAP12O43422 761 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CALUO43852 315 aaPredicted RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 EDF1O60869 148 aaKnown RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ATP6V1G1O75348 118 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SOAT2O75908 522 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 DNAJB5O75953 348 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 PLEKHA8P1O95397 391 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ITGA2BP08514 1039 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 IL6RP08887 468 aaPredicted RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 T-ENOLP0DO92 83 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 RARBP10826 455 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 UCHL3P15374 230 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 TSHRP16473 764 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 GM2AP17900 193 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 VCAM1P19320 739 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 FGFR2P21802 821 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 PRDX5P30044 214 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 COILP38432 576 aaPredicted RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 RPL21P46778 160 aaKnown RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ALDH9A1P49189 494 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 DNA2P51530 1060 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF134P52741 427 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 PDE1BQ01064 536 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 PPATQ06203 517 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ASPHQ12797 758 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 MED21Q13503 144 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 KIF22Q14807 665 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 GRM4Q14833 912 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 NONOQ15233 471 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 NFIL3Q16649 462 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 KYNUQ16719 465 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF260Q3ZCT1 412 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 DNAL1Q4LDG9 190 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SBK1Q52WX2 424 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 HYIQ5T013 277 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 TREML2Q5T2D2 321 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SEL1L2Q5TEA6 688 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 NAPRTQ6XQN6 538 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 KYAT3Q6YP21 454 aaKnown RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 KIF6Q6ZMV9 814 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 C3orf62Q6ZUJ4 267 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CENPUQ71F23 418 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF571Q7Z3V5 609 aaPredicted RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 FAM90A1Q86YD7 464 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 TMEM126BQ8IUX1 230 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 GALNT16Q8N428 558 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ALLCQ8N6M5 410 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 MAGEB6Q8N7X4 407 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 FAM133AQ8N9E0 248 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SLC35G2Q8TBE7 412 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 WDR60Q8WVS4 1066 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 C17orf50Q8WW18 174 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 RAD54LQ92698 747 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 APBB2Q92870 758 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SNF8Q96H20 258 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 VPS50Q96JG6 964 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZC3H10Q96K80 434 aaKnown RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 TEKT5Q96M29 485 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 C5orf34Q96MH7 638 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CFAP57Q96MR6 1250 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 FNBP1Q96RU3 617 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 TSPAN18Q96SJ8 248 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SIKE1Q9BRV8 207 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 POLR3CQ9BUI4 534 aaPredicted RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 STK33Q9BYT3 514 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 PUS3Q9BZE2 481 aaKnown RBP3.39□□□□□ -1.87
CCNT1-203ENST00000550457 OSBPL8Q9BZF1 889 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 GLT8D2Q9H1C3 349 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 C1orf21Q9H246 121 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ARMT1Q9H993 441 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF287Q9HBT7 754 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 C6orf50Q9HD87 102 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SLAMF7Q9NQ25 335 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CNNM1Q9NRU3 951 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 NDE1Q9NXR1 346 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 BARHL2Q9NY43 387 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 STK32BQ9NY57 414 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 CFAP97Q9P2B7 532 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 SLC24A2Q9UI40 661 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF580Q9UK33 172 aa3.39□□□□□ -1.87
CCNT1-203ENST00000550457 ZMYND8Q9ULU4 1186 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms