RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CHRNA4P43681 627 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 RPS9P46781 194 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 RUNX1T1Q06455 604 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 SFSWAPQ12872 951 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 CTC1Q2NKJ3 1217 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 MYLK3Q32MK0 819 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 STXBP5Q5T5C0 1151 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 FAM45BPQ6NSW5 357 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 LBX2Q6XYB7 198 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 ANKRD23Q86SG2 305 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 ERI1Q8IV48 349 aaKnown RBP10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 FAM45AQ8TCE6 357 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 COX4I2Q96KJ9 171 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 KATNAL1Q9BW62 490 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 HPS4Q9NQG7 708 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 CNGB3Q9NQW8 809 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 CATSPERZQ9NTU4 200 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 UXTQ9UBK9 157 aaPredicted RBP10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 PNMA8BQ9ULN7 279 aaPredicted RBP10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 A0A1B0GUL6 1792 aa10.26□□□□□ -0.77
SMARCC2-209ENST00000550164 F5H5T6 163 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 EI24O14681 340 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TSPAN1O60635 241 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CPSF4O95639 269 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CST1P01037 141 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 HDCP19113 662 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ZNF135P52742 658 aaPredicted RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TMEM214Q6NUQ4 689 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CNSTQ6PJW8 725 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 GLB1LQ6UWU2 654 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 GCNT7Q6ZNI0 430 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TBC1D21Q8IYX1 336 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ARFGAP1Q8N6T3 406 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ZFP28Q8NHY6 868 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CENPNQ96H22 339 aaPredicted RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 HBEGFQ99075 208 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 SEMA3CQ99985 751 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 SENP6Q9GZR1 1112 aaPredicted RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CACYBPQ9HB71 228 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ZFP14Q9HCL3 533 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ABCB10Q9NRK6 738 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TMEM161AQ9NX61 479 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CNOT6Q9ULM6 557 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 DPYSL4O14531 572 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 FFAR3O14843 346 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 GPR42O15529 346 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 MSI1O43347 362 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 SNNO75324 88 aaPredicted RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ATG7O95352 703 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CLIC3O95833 236 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 IDO1P14902 403 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ALOX12P18054 663 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 POU1F1P28069 291 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 HARS2P49590 506 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ST13P50502 369 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC10A2Q12908 348 aaPredicted RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 FSCN1Q16658 493 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 PTPRNQ16849 979 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 KCTD8Q6ZWB6 473 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 GLT6D1Q7Z4J2 308 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 SYTL1Q8IYJ3 562 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TWIST2Q8WVJ9 160 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 EPS8L2Q9H6S3 715 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 FANCEQ9HB96 536 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TPRKBQ9Y3C4 175 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ASB3Q9Y575 518 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 YJEFN3A6XGL0 299 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CAPN14A8MX76 684 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ADM5C9JUS6 153 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ARHGEF9O43307 516 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 BCAS2O75934 225 aaPredicted RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 RGS20O76081 388 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 MFN2O95140 757 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 MSH3P20585 1137 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 YWHAQP27348 245 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 SCNN1GP51170 649 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 LIPEQ05469 1076 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 CEACAM7Q14002 265 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 XKR5Q6UX68 686 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 PSMA8Q8TAA3 256 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 KLRG1Q96E93 195 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 TEKT5Q96M29 485 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ZFP42Q96MM3 310 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 DHRS4Q9BTZ2 278 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 RHOBTB2Q9BYZ6 727 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 ZBTB26Q9HCK0 441 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 OAZ3Q9UMX2 235 aa10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
SMARCC2-209ENST00000550164 KLRG2A4D1S0 409 aaPredicted RBP10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC22A3O75751 556 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 AHSGP02765 367 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 SLC1A2P43004 574 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 GLUD2P49448 558 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 ENTPD1P49961 510 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 OXCT1P55809 520 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 NRG1Q02297 640 aaPredicted RBP10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 BNIP3Q12983 259 aa10.24□□□□□ -0.77
SMARCC2-209ENST00000550164 RSBN1Q5VWQ0 802 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms