RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 SSC4DQ8WTU2 575 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 RAB7BQ96AH8 199 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 WDR92Q96MX6 357 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 GSDMAQ96QA5 445 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 DPEP2Q9H4A9 486 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 ZNF768Q9H5H4 540 aaKnown RBP8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 WDCPQ9H6R7 721 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 SUDS3Q9H7L9 328 aaPredicted RBP8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 APMAPQ9HDC9 416 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 SLC39A1Q9NY26 324 aa8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 ARMCX3Q9UH62 379 aaPredicted RBP8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 AJAP1Q9UKB5 411 aaPredicted RBP8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.72□□□□□ -1.01
AC055716.1-201ENST00000550077 NOTCH2Q04721 2471 aa8.71□□□□□ -1.01
AC055716.1-201ENST00000550077 EFCAB7A8K855 629 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 FAM72CH0Y354 149 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 BIN1O00499 593 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 SLC16A3O15427 465 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 NUDT21O43809 227 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 HSF2BPO75031 334 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 SMC2O95347 1197 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 TNFP01375 233 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 FGF1P05230 155 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 MYL1P05976 194 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 PTMAP06454 111 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 AK4P27144 223 aaPredicted RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 ERCC5P28715 1186 aaPredicted RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 SULT1E1P49888 294 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 BLKP51451 505 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 LIMK2P53671 638 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 SLC6A3Q01959 620 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 GCNT1Q02742 428 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 PTPN20Q4JDL3 420 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 PRR30Q53SZ7 412 aaPredicted RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 EFHC1Q5JVL4 640 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 FHL5Q5TD97 284 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 FAM72AQ5TYM5 149 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 FAM72DQ6L9T8 149 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 RETSATQ6NUM9 610 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 ATCAYQ86WG3 371 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 C17orf82Q86X59 251 aaPredicted RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 FAM72BQ86X60 149 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 C1orf131Q8NDD1 294 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 OR6C4Q8NGE1 309 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 OR2AP1Q8NGE2 309 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 APOBEC4Q8WW27 367 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 ARHGEF2Q92974 986 aaKnown RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 SMARCE1Q969G3 411 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 NT5C3BQ969T7 300 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 RTP4Q96DX8 246 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 EXOC2Q96KP1 924 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 TRIM62Q9BVG3 475 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 TRIM5Q9C035 493 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 B3GNT4Q9C0J1 378 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 KCNF1Q9H3M0 494 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 UBE2TQ9NPD8 197 aaPredicted RBP8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 ASNSD1Q9NWL6 643 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 DNAI1Q9UI46 699 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 PLEKHM1Q9Y4G2 1056 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 KCNMB2Q9Y691 235 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 DGKBQ9Y6T7 804 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 CREBBPQ92793 2442 aa8.71□□□□□ -1.02
AC055716.1-201ENST00000550077 CELSR2Q9HCU4 2923 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 CSMD1Q96PZ7 3565 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 A8MU76 341 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 HGSO14964 777 aaPredicted RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 BUB1BO60566 1050 aaPredicted RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 DNAJB5O75953 348 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 ECEL1O95672 775 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 POP4O95707 220 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 GSRP00390 522 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 GLI1P08151 1106 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 MSNP26038 577 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 GNA15P30679 374 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 LIG3P49916 1009 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 TPM4P67936 248 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 FKBP3Q00688 224 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 SLC20A2Q08357 652 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 MRPL49Q13405 166 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 NR1D2Q14995 579 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 EIF2S3LQ2VIR3 472 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 CRYBG3Q68DQ2 2970 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 ZNF438Q7Z4V0 828 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 PHLDB2Q86SQ0 1253 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 PLPP6Q8IY26 295 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 NRSN1Q8IZ57 195 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 ENOX1Q8TC92 643 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 GPBAR1Q8TDU6 330 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 ISG20Q96AZ6 181 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 TCTN2Q96GX1 697 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 C1orf74Q96LT6 269 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 NSMCE3Q96MG7 304 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 CATSPER2Q96P56 530 aa8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 INTS2Q9H0H0 1204 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 NOL6Q9H6R4 1146 aaKnown RBP8.7□□□□□ -1.02
AC055716.1-201ENST00000550077 CYP4F12Q9HCS2 524 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms