RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CATSPERBQ9H7T0 1116 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 FGF22Q9HCT0 170 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 SEPT11Q9NVA2 429 aaKnown RBP15.51■□□□□ 0.07
RAB5C-205ENST00000550013 GPATCH2LQ9NWQ4 482 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 ATP8A1Q9Y2Q0 1164 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 SPTA1P02549 2419 aa15.51■□□□□ 0.07
RAB5C-205ENST00000550013 CYSRT1A8MQ03 144 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 TMX2-CTNND1H3BSU7 103 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 PRAMEF11O60813 436 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 JMJD7P0C870 316 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 ITIH1P19827 911 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 RALGDSQ12967 914 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 GRM3Q14832 879 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 LINC00303Q3SY05 128 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 CDKAL1Q5VV42 579 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 BRAT1Q6PJG6 821 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 ATL2Q8NHH9 583 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 FUBP1Q96AE4 644 aaKnown RBP15.5■□□□□ 0.07
RAB5C-205ENST00000550013 ZNF641Q96N77 438 aaPredicted RBP15.5■□□□□ 0.07
RAB5C-205ENST00000550013 TMEM74Q96NL1 305 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 CLMPQ9H6B4 373 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 MRPL40Q9NQ50 206 aaKnown RBP15.5■□□□□ 0.07
RAB5C-205ENST00000550013 LOXL2Q9Y4K0 774 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 DGKBQ9Y6T7 804 aa15.5■□□□□ 0.07
RAB5C-205ENST00000550013 FGF10O15520 208 aaPredicted RBP15.49■□□□□ 0.07
RAB5C-205ENST00000550013 RECQL5O94762 991 aaPredicted RBP15.49■□□□□ 0.07
RAB5C-205ENST00000550013 ETV5P41161 510 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 PAPOLAP51003 745 aaKnown RBP15.49■□□□□ 0.07
RAB5C-205ENST00000550013 KIAA1024LP59773 190 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 TPI1P60174 286 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 OGDHQ02218 1023 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 NFATC3Q12968 1075 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 SYCP1Q15431 976 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 PPP1R15BQ5SWA1 713 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 FKBP15Q5T1M5 1219 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 CERCAMQ5T4B2 595 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 USP53Q70EK8 1073 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 PRICKLE2Q7Z3G6 844 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 TMPRSS9Q7Z410 1059 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 SPRED1Q7Z699 444 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 TAF8Q7Z7C8 310 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 SRLQ86TD4 932 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
RAB5C-205ENST00000550013 FAM46DQ8NEK8 389 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 OR6C4Q8NGE1 309 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 OR56A4Q8NGH8 313 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 CCL4L1Q8NHW4 92 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 ENOX1Q8TC92 643 aaKnown RBP15.49■□□□□ 0.07
RAB5C-205ENST00000550013 TUBGCP5Q96RT8 1024 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 CNPY3Q9BT09 278 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 SLC39A8Q9C0K1 460 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 TMEM168Q9H0V1 697 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 APPL1Q9UKG1 709 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 ACSL6Q9UKU0 697 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 RNF215Q9Y6U7 377 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 NAV2Q8IVL1 2488 aa15.49■□□□□ 0.07
RAB5C-205ENST00000550013 ANKRD62A6NC57 917 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 B4DGG1 531 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 NVLO15381 856 aaKnown RBP15.48■□□□□ 0.07
RAB5C-205ENST00000550013 GLB1P16278 677 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 GM2AP17900 193 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 NDST2P52849 883 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 ZFP36L1Q07352 338 aaKnown RBP15.48■□□□□ 0.07
RAB5C-205ENST00000550013 CA9Q16790 459 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 CT47A1Q5JQC4 288 aaPredicted RBP15.48■□□□□ 0.07
RAB5C-205ENST00000550013 OGFOD3Q6PK18 319 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 LIPIQ6XZB0 460 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 VASH2Q86V25 355 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 PELI3Q8N2H9 469 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 EXTL1Q92935 676 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 SGF29Q96ES7 293 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 AGPAT1Q99943 283 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 LGR4Q9BXB1 951 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 ATP13A3Q9H7F0 1226 aa15.48■□□□□ 0.07
RAB5C-205ENST00000550013 PRAMEF33A0A0G2JMD5 474 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 A8MX80 341 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 CACNB4O00305 520 aaPredicted RBP15.47■□□□□ 0.07
RAB5C-205ENST00000550013 PRAMEF10O60809 474 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 PALMO75781 387 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 TPM2P07951 284 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 ELFN1P0C7U0 828 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 LIPCP11150 499 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 SERPINA4P29622 427 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 CSNK1DP48730 415 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 AIF1P55008 147 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 KCNC4Q03721 635 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 HLTFQ14527 1009 aaKnown RBP eCLIP15.47■□□□□ 0.07
RAB5C-205ENST00000550013 C14orf28Q4W4Y0 310 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 SPECC1LQ69YQ0 1117 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 ARHGAP36Q6ZRI8 547 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 ZFAND4Q86XD8 727 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 SLITRK4Q8IW52 837 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 ECHDC3Q96DC8 303 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 NSMCE3Q96MG7 304 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 PCMTD1Q96MG8 357 aaPredicted RBP15.47■□□□□ 0.07
RAB5C-205ENST00000550013 CYP4F12Q9HCS2 524 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 FANCLQ9NW38 375 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 FOXJ2Q9P0K8 574 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 LRIT1Q9P2V4 623 aa15.47■□□□□ 0.07
RAB5C-205ENST00000550013 MOSPD1Q9UJG1 213 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms