RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 MAFKO60675 156 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 USP12O75317 370 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
GCN1-206ENST00000549815 RECQL5O94762 991 aaPredicted RBP13.5□□□□□ -0.25
GCN1-206ENST00000549815 SERPING1P05155 500 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 PCCBP05166 539 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 ANXA6P08133 673 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 FAM228BP0C875 321 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 IL4RP24394 825 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 ACTN2P35609 894 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 SCNN1BP51168 640 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 BLKP51451 505 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 RENBPP51606 427 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 AP1S1P61966 158 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 ZBED6P86452 979 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 PIGHQ14442 188 aaPredicted RBP13.5□□□□□ -0.25
GCN1-206ENST00000549815 CFAP58Q5T655 872 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 ENPP7Q6UWV6 458 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 PELI3Q8N2H9 469 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 FSTL5Q8N475 847 aaPredicted RBP13.5□□□□□ -0.25
GCN1-206ENST00000549815 FAM71BQ8TC56 605 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 TEKT4Q8WW24 435 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 HSPH1Q92598 858 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 FUBP1Q96AE4 644 aaKnown RBP13.5□□□□□ -0.25
GCN1-206ENST00000549815 BTBD6Q96KE9 485 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 ABCG4Q9H172 646 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 PRORYQ9H606 182 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.5□□□□□ -0.25
GCN1-206ENST00000549815 CAPN11Q9UMQ6 739 aa13.5□□□□□ -0.25
GCN1-206ENST00000549815 RASGRP1O95267 797 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 MPOP05164 745 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 CYP1A2P05177 515 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 HOXC4P09017 264 aaPredicted RBP13.49□□□□□ -0.25
GCN1-206ENST00000549815 HTR1BP28222 390 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 TRIM23P36406 574 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 ARL4AP40617 200 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 LSSP48449 732 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 ARSEP51690 589 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 PDX1P52945 283 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 UBASH3AP57075 661 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 KIAA1024LP59773 190 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 SRP54P61011 504 aaKnown RBP13.49□□□□□ -0.25
GCN1-206ENST00000549815 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
GCN1-206ENST00000549815 ELOCQ15369 112 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 LVRNQ6Q4G3 990 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 IGF2-ASQ6U949 168 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 CRTC1Q6UUV9 634 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 TMCO3Q6UWJ1 677 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 HID1Q8IV36 788 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 CBARPQ8N350 705 aaPredicted RBP13.49□□□□□ -0.25
GCN1-206ENST00000549815 SDR16C5Q8N3Y7 309 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 TPCN2Q8NHX9 752 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 PCDH19Q8TAB3 1148 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 GLMNQ92990 594 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 PDXPQ96GD0 296 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 PRR11Q96HE9 360 aaPredicted RBP13.49□□□□□ -0.25
GCN1-206ENST00000549815 HIC2Q96JB3 615 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 WDR92Q96MX6 357 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 ZNF578Q96N58 590 aaPredicted RBP13.49□□□□□ -0.25
GCN1-206ENST00000549815 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 MGME1Q9BQP7 344 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
GCN1-206ENST00000549815 NUP85Q9BW27 656 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 POLR1BQ9H9Y6 1135 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 ASCL3Q9NQ33 180 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 B4GALT6Q9UBX8 382 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 ANAPC7Q9UJX3 599 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 ENTPD2Q9Y5L3 495 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 RAI2Q9Y5P3 530 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 DGKBQ9Y6T7 804 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 SHROOM3Q8TF72 1996 aa13.49□□□□□ -0.25
GCN1-206ENST00000549815 KIF26BQ2KJY2 2108 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.48□□□□□ -0.25
GCN1-206ENST00000549815 TMEM202A6NGA9 273 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 NTN3O00634 580 aaPredicted RBP13.48□□□□□ -0.25
GCN1-206ENST00000549815 RRP8O43159 456 aaKnown RBP13.48□□□□□ -0.25
GCN1-206ENST00000549815 SOCS5O75159 536 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 TCEA3O75764 348 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 GYPCP04921 128 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 ALPIP09923 528 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 ELFN1P0C7U0 828 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 HSPA9P38646 679 aaKnown RBP13.48□□□□□ -0.25
GCN1-206ENST00000549815 RPIAP49247 311 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 GABREP78334 506 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 TRAF2Q12933 501 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 COL9A2Q14055 689 aaPredicted RBP13.48□□□□□ -0.25
GCN1-206ENST00000549815 ESRP1Q6NXG1 681 aaKnown RBP13.48□□□□□ -0.25
GCN1-206ENST00000549815 LRRC69Q6ZNQ3 347 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 LSMEM2Q8N112 164 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 KYQ8NBH2 561 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 OR1E3Q8WZA6 343 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 NAT6Q93015 286 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 IQCDQ96DY2 449 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 COQ10AQ96MF6 247 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.25
GCN1-206ENST00000549815 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 FGF22Q9HCT0 170 aa13.48□□□□□ -0.25
GCN1-206ENST00000549815 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms