RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 AFTPHQ6ULP2 937 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 KIAA0907Q7Z7F0 614 aaPredicted RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 DENND1CQ8IV53 801 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 SLC22A9Q8IVM8 553 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 TMEM199Q8N511 208 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 WBP2Q969T9 261 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 ISG20Q96AZ6 181 aaKnown RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 LYSMD1Q96S90 227 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 OLFM1Q99784 485 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CADM1Q9BY67 442 aaKnown RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 NOD2Q9HC29 1040 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 ZNF358Q9NW07 568 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.02□□□□□ -0.818e-7■■□□□ 13.7
RAB5B-206ENST00000549505 ZMYM5Q9UJ78 669 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 VPS28Q9UK41 221 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 VWA7Q9Y334 891 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 C2orf78A6NCI8 922 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 F8W8V4 182 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 TEX28O15482 410 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 GRID2O43424 1007 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 RPL17P18621 184 aaKnown RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 ARSDP51689 593 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 AGAP9Q5VTM2 703 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 ZNF549Q6P9A3 640 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CNSTQ6PJW8 725 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CCDC149Q6ZUS6 474 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CHSY3Q70JA7 882 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 DEFB128Q7Z7B8 93 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 TBC1D1Q86TI0 1168 aaPredicted RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CIR1Q86X95 450 aaPredicted RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 TREML1Q86YW5 311 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CHCHD4Q8N4Q1 142 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 PABPC5Q96DU9 382 aaKnown RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CINPQ9BW66 212 aaPredicted RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 ZNF395Q9H8N7 513 aaPredicted RBP10.02□□□□□ -0.81
RAB5B-206ENST00000549505 CYP4F11Q9HBI6 524 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 MAGEE1Q9HCI5 957 aa10.02□□□□□ -0.81
RAB5B-206ENST00000549505 C5orf67F2Z3F1 127 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 LMNAP02545 664 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 CDC16Q13042 620 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 CTBP1Q13363 440 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ITGA9Q13797 1035 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 CDKN3Q16667 212 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 FAM83EQ2M2I3 478 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 DNAL1Q4LDG9 190 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 KIAA1841Q6NSI8 718 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 MRNIPQ6NTE8 343 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 FAM13CQ8NE31 585 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 OR7D4Q8NG98 312 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 FIBINQ8TAL6 211 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 PHOSPHO2Q8TCD6 241 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 DIS3LQ8TF46 1054 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ACDQ96AP0 544 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 PDLIM5Q96HC4 596 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ASB2Q96Q27 587 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 TACO1Q9BSH4 297 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 FEM1AQ9BSK4 669 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 AARSD1Q9BTE6 412 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ILKAPQ9H0C8 392 aaPredicted RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 TFB2MQ9H5Q4 396 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 FBXO6Q9NRD1 293 aaPredicted RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 TAS2R1Q9NYW7 299 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 OAS3Q9Y6K5 1087 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 MTCL1Q9Y4B5 1905 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 HDAC3O15379 428 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 SOCS5O75159 536 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 NEBLO76041 1014 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 CBX6O95503 412 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 SP100P23497 879 aaPredicted RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 RGRP47804 291 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 GRIA4P48058 902 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 MAXP61244 160 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 RPS24P62847 133 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ZXDBP98169 803 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 UBE3AQ05086 875 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 SETMARQ53H47 684 aaPredicted RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 RFWD3Q6PCD5 774 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ALYREFQ86V81 257 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 KDM1BQ8NB78 822 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 HEXDCQ8WVB3 486 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 KCTD4Q8WVF5 259 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 LPGAT1Q92604 370 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 IFT43Q96FT9 208 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 CDKN2AIPNLQ96HQ2 116 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 POLR3BQ9NW08 1133 aaPredicted RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 ARHGAP26Q9UNA1 814 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 MED16Q9Y2X0 877 aa10.01□□□□□ -0.81
RAB5B-206ENST00000549505 MYO18AQ92614 2054 aaKnown RBP10.01□□□□□ -0.81
RAB5B-206ENST00000549505 KIF26AQ9ULI4 1882 aaPredicted RBP10□□□□□ -0.81
RAB5B-206ENST00000549505 CD3EAPO15446 510 aaKnown RBP10□□□□□ -0.81
RAB5B-206ENST00000549505 FGF4P08620 206 aa10□□□□□ -0.81
RAB5B-206ENST00000549505 HSPA1AP0DMV8 641 aaKnown RBP10□□□□□ -0.81
RAB5B-206ENST00000549505 HSPA1BP0DMV9 641 aaKnown RBP10□□□□□ -0.81
RAB5B-206ENST00000549505 RPS3P23396 243 aaKnown RBP eCLIP10□□□□□ -0.81
RAB5B-206ENST00000549505 CDC25CP30307 473 aa10□□□□□ -0.81
RAB5B-206ENST00000549505 NAA25Q14CX7 972 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms