RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PSMD13Q9UNM6 376 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TDRKHQ9Y2W6 561 aaKnown RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 G3V2L1 256 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TPSB2P20231 275 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 CHRM3P20309 590 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 YWHAQP27348 245 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 CYP2C18P33260 490 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 SPRP35270 261 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 HNRNPDQ14103 355 aaKnown RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TPSAB1Q15661 275 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 LRRC8EQ6NSJ5 796 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 CHST15Q7LFX5 561 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 DRAXINQ8NBI3 349 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 DGCR14Q96DF8 476 aaKnown RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 CIB1Q99828 191 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 TRPC7Q9HCX4 862 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 ARHGEF38Q9NXL2 777 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 EVLQ9UI08 416 aaPredicted RBP11.16□□□□□ -0.62
LINC00661-204ENST00000549354 COMMD10Q9Y6G5 202 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 VWA8A3KMH1 1905 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
LINC00661-204ENST00000549354 HOXA2O43364 376 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 RNASEH2AO75792 299 aaKnown RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 OR1G1P47890 313 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 PGFP49763 221 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 COL9A2Q14055 689 aaPredicted RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 NFE2Q16621 373 aaPredicted RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 ARL13BQ3SXY8 428 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 LRRC8BQ6P9F7 803 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 JADE3Q92613 823 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 ABCC13Q9NSE7 274 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 MARCH5Q9NX47 278 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 ADAM28Q9UKQ2 775 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 PCDHB12Q9Y5F1 795 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 FAM92AA1XBS5 289 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 OR6C75A6NL08 312 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SUPT7LO94864 414 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 ASLP04424 464 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 PRSS56P0CW18 603 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 RPL5P46777 297 aaKnown RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SLC5A3P53794 718 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 KIF19Q2TAC6 998 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 AGKQ53H12 422 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 RBM20Q5T481 1227 aaKnown RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SCD5Q86SK9 330 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 CPNE9Q8IYJ1 553 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 LRTOMTQ8WZ04 291 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 TOX2Q96NM4 488 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 FAM193BQ96PV7 902 aaPredicted RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 DNAJC28Q9NX36 388 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 KCTD3Q9Y597 815 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 ACTL7AQ9Y615 435 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 TBX18O95935 607 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 THRAP10827 490 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 PTPN3P26045 913 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 HTR7P34969 479 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 ECT2LQ008S8 904 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 CAPRIN1Q14444 709 aaKnown RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 MTX3Q5HYI7 312 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 VARS2Q5ST30 1063 aaKnown RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 TAC4Q86UU9 113 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 PIM3Q86V86 326 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 CEP97Q8IW35 865 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 FSTL5Q8N475 847 aaPredicted RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 DQX1Q8TE96 717 aaKnown RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SH3RF2Q8TEC5 729 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 PRICKLE1Q96MT3 831 aaPredicted RBP11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 STK39Q9UEW8 545 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.62
LINC00661-204ENST00000549354 RGSL1A5PLK6 1076 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 PDLIM1O00151 329 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 TADA2AO75478 443 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 LRIG2O94898 1065 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NR4A1P22736 598 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 HARS2P49590 506 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NSUN2Q08J23 767 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 PTK2BQ14289 1009 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 PTPRRQ15256 657 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SLC39A12Q504Y0 691 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 BRMS1LQ5PSV4 323 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 TIFABQ6ZNK6 161 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NPAS4Q8IUM7 802 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 DDIASQ8IXT1 998 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 HSPBAP1Q96EW2 488 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 HAPLN3Q96S86 360 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SERPINI1Q99574 410 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 RBBP8Q99708 897 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 CCT7Q99832 543 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 RTKNQ9BST9 563 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 ATXN10Q9UBB4 475 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NEU3Q9UQ49 428 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 BTRCQ9Y297 605 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms