RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 MAGEB5Q9BZ81 275 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 CPEB1Q9BZB8 566 aaKnown RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 TTYH3Q9C0H2 523 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 OTOGQ6ZRI0 2925 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 LRRC53A6NM62 1247 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 SIGLEC16A6NMB1 481 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 MTSS1O43312 755 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 GSRP00390 522 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 CALB1P05937 261 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 KRT3P12035 628 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 RHOQP17081 205 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 ADRA1BP35368 520 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 PTPN9P43378 593 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 FANCCQ00597 558 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 ZNF805Q5CZA5 627 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 ACAD10Q6JQN1 1059 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 MCOLN2Q8IZK6 566 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 C3orf20Q8ND61 904 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 ARHGEF2Q92974 986 aaKnown RBP12.31□□□□□ -0.44
DDX54-206ENST00000549271 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 OSBPL1AQ9BXW6 950 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 MAGEH1Q9H213 219 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
DDX54-206ENST00000549271 TMEM248Q9NWD8 314 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 AIPL1Q9NZN9 384 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 HECAQ9UBI9 543 aaPredicted RBP12.31□□□□□ -0.44
DDX54-206ENST00000549271 GULP1Q9UBP9 304 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 NEU3Q9UQ49 428 aa12.31□□□□□ -0.44
DDX54-206ENST00000549271 FCF1Q9Y324 198 aaKnown RBP12.31□□□□□ -0.44
DDX54-206ENST00000549271 C16orf96A6NNT2 1141 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 TOR1BO14657 336 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 AREL1O15033 823 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 AGFG2O95081 481 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 POP4O95707 220 aaKnown RBP12.3□□□□□ -0.44
DDX54-206ENST00000549271 CELA2BP08218 269 aaPredicted RBP12.3□□□□□ -0.44
DDX54-206ENST00000549271 CCDC172P0C7W6 258 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 TNFAIP3P21580 790 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 SDC4P31431 198 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 ACVRL1P37023 503 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 PBX1P40424 430 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 ABL2P42684 1182 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 DNA2P51530 1060 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 ARSDP51689 593 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 MAPK10P53779 464 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 HDAC4P56524 1084 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 SGCGQ13326 291 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 PTK2BQ14289 1009 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 CDO1Q16878 200 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 LVRNQ6Q4G3 990 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 STRADAQ7RTN6 431 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 ZNF571Q7Z3V5 609 aaPredicted RBP12.3□□□□□ -0.44
DDX54-206ENST00000549271 SLITRK4Q8IW52 837 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 OR2AP1Q8NGE2 309 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 JPH3Q8WXH2 748 aaPredicted RBP12.3□□□□□ -0.44
DDX54-206ENST00000549271 CATSPER2Q96P56 530 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 CMKLR1Q99788 373 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 NDFIP2Q9NV92 336 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 SIRPGQ9P1W8 387 aa12.3□□□□□ -0.44
DDX54-206ENST00000549271 POLQO75417 2590 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 ZSCAN5CA6NGD5 496 aaPredicted RBP12.29□□□□□ -0.44
DDX54-206ENST00000549271 IGLON5A6NGN9 336 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FAM72CH0Y354 149 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 AGRPO00253 132 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 SERPINC1P01008 464 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 LIFP15018 202 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 PTMSP20962 102 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 GPD1P21695 349 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 PRKCIP41743 596 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 ATP1A2P50993 1020 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 THOP1P52888 689 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
DDX54-206ENST00000549271 RPL7AP62424 266 aaKnown RBP12.29□□□□□ -0.44
DDX54-206ENST00000549271 YPEL5P62699 121 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 POLD3Q15054 466 aaPredicted RBP12.29□□□□□ -0.44
DDX54-206ENST00000549271 MYLK3Q32MK0 819 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FAXCQ5TGI0 409 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FAM72AQ5TYM5 149 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FAM72DQ6L9T8 149 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 TMPRSS9Q7Z410 1059 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FAM72BQ86X60 149 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 DNAAF5Q86Y56 855 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 TICAM1Q8IUC6 712 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 CCNJLQ8IV13 435 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FSTL5Q8N475 847 aaPredicted RBP12.29□□□□□ -0.44
DDX54-206ENST00000549271 CCDC185Q8N715 623 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 GPBAR1Q8TDU6 330 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 SSC4DQ8WTU2 575 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
DDX54-206ENST00000549271 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms