RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ZSCAN30Q86W11 494 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 DENND6BQ8NEG7 585 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 MAML1Q92585 1016 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 HDAC11Q96DB2 347 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 TSGA13Q96PP4 275 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 CDC6Q99741 560 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 TRIM10Q9UDY6 481 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 RAI2Q9Y5P3 530 aa15.86■□□□□ 0.13
DDX54-205ENST00000548786 TDRD6O60522 2096 aaKnown RBP15.86■□□□□ 0.13
DDX54-205ENST00000548786 MACROD2A1Z1Q3 448 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 SCAMP1O15126 338 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 HTRA2O43464 458 aaPredicted RBP15.85■□□□□ 0.13
DDX54-205ENST00000548786 CST8O60676 142 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 PGLSO95336 258 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 PDHA1P08559 390 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 ALPIP09923 528 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 PECAM1P16284 738 aaPredicted RBP15.85■□□□□ 0.13
DDX54-205ENST00000548786 VAV2P52735 878 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 PFN3P60673 137 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 ADCY2Q08462 1091 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 PPIDQ08752 370 aaKnown RBP15.85■□□□□ 0.13
DDX54-205ENST00000548786 NIPAL4Q0D2K0 466 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 IHHQ14623 411 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 ARMC12Q5T9G4 340 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 LIPIQ6XZB0 460 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 NYAP1Q6ZVC0 841 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 PLA2G15Q8NCC3 412 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 ASB12Q8WXK4 309 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 CNDP2Q96KP4 475 aaKnown RBP15.85■□□□□ 0.13
DDX54-205ENST00000548786 CNTNAP3BQ96NU0 1288 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 SCNM1Q9BWG6 230 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 HEMGNQ9BXL5 484 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 CNTNAP3Q9BZ76 1288 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 IMPACTQ9P2X3 320 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 KLF15Q9UIH9 416 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 KLK13Q9UKR3 277 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 OR1A2Q9Y585 309 aa15.85■□□□□ 0.13
DDX54-205ENST00000548786 SPTY2D1-AS1A0A0U1RR47 76 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 NPIPB15A6NHN6 443 aaPredicted RBP15.84■□□□□ 0.13
DDX54-205ENST00000548786 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 ZNF487B1APH4 448 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 TNFSF14O43557 240 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 PIAS2O75928 621 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 RECQL5O94762 991 aaPredicted RBP15.84■□□□□ 0.13
DDX54-205ENST00000548786 LDOC1O95751 146 aaPredicted RBP15.84■□□□□ 0.13
DDX54-205ENST00000548786 ZFXP17010 805 aaPredicted RBP15.84■□□□□ 0.13
DDX54-205ENST00000548786 DGKAP23743 735 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 CD86P42081 329 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 INPP5AQ14642 412 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 PDK1Q15118 436 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 KANSL1Q7Z3B3 1105 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 TSPAN33Q86UF1 283 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 PARGQ86W56 976 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 KATNAL2Q8IYT4 538 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 RBFAQ8N0V3 343 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 SLC25A45Q8N413 288 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 AGAP3Q96P47 875 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 TCEAL2Q9H3H9 227 aaPredicted RBP15.84■□□□□ 0.13
DDX54-205ENST00000548786 GPR27Q9NS67 375 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 TOR4AQ9NXH8 423 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 APOBEC2Q9Y235 224 aaKnown RBP15.84■□□□□ 0.13
DDX54-205ENST00000548786 CHKBQ9Y259 395 aa15.84■□□□□ 0.13
DDX54-205ENST00000548786 ACACBO00763 2458 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 GOLGA6CA6NDK9 693 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 GOLGA6BA6NDN3 693 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 F5H423 210 aaPredicted RBP15.83■□□□□ 0.12
DDX54-205ENST00000548786 TRIM38O00635 465 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 ENC1O14682 589 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 PPP1R12AO14974 1030 aaPredicted RBP15.83■□□□□ 0.12
DDX54-205ENST00000548786 ZRANB2O95218 330 aaKnown RBP eCLIP15.83■□□□□ 0.12
DDX54-205ENST00000548786 GOLGA6DP0CG33 693 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 MYF5P13349 255 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 JUNDP17535 347 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 GM2AP17900 193 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 LHCGRP22888 699 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 VIPR1P32241 457 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 EPHB1P54762 984 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 EIF2B5Q13144 721 aaKnown RBP15.83■□□□□ 0.12
DDX54-205ENST00000548786 CNGA3Q16281 694 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 RALGPS1Q5JS13 557 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 KDELC2Q7Z4H8 507 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 VSIG1Q86XK7 387 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 MARCH9Q86YJ5 346 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 DCP2Q8IU60 420 aaKnown RBP15.83■□□□□ 0.12
DDX54-205ENST00000548786 LPCAT1Q8NF37 534 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 ARRDC2Q8TBH0 407 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 FAM174AQ8TBP5 190 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 OLFM3Q96PB7 478 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 GOLGA6AQ9NYA3 693 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 PNMA8BQ9ULN7 279 aaPredicted RBP15.83■□□□□ 0.12
DDX54-205ENST00000548786 PHTF1Q9UMS5 762 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 WASF3Q9UPY6 502 aa15.83■□□□□ 0.12
DDX54-205ENST00000548786 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.83■□□□□ 0.12
DDX54-205ENST00000548786 hCG_1818297A0A087WSY0 165 aa15.82■□□□□ 0.12
DDX54-205ENST00000548786 GRID2IPA4D2P6 1211 aa15.82■□□□□ 0.12
DDX54-205ENST00000548786 SIGLEC6O43699 453 aa15.82■□□□□ 0.12
DDX54-205ENST00000548786 HEXIM1O94992 359 aaKnown RBP15.82■□□□□ 0.12
DDX54-205ENST00000548786 NME1P15531 152 aaKnown RBP15.82■□□□□ 0.12
DDX54-205ENST00000548786 ETV3P41162 512 aa15.82■□□□□ 0.12
DDX54-205ENST00000548786 CLDN6P56747 220 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms