RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, human

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC4-205	ENST00000548313	TIMM23	O14925	209 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	LDLRAD4	O15165	306 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GAGE7	O76087	117 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	RTN3	O95197	1032 aa	Predicted RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	CH25H	O95992	272 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ACAA1	P09110	424 aa	Predicted RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GAGE12F	P0CL80	117 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GAGE12G	P0CL81	117 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GAGE12I	P0CL82	117 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HSPA1A	P0DMV8	641 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HSPA1B	P0DMV9	641 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	DDX5	P17844	614 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	EDN2	P20800	178 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PSMA4	P25789	261 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SHMT1	P34896	483 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SEC61A1	P61619	476 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ZXDB	P98169	803 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GAGE1	Q13065	139 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GAGE4	Q13068	117 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	DDX10	Q13206	875 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	CCNG2	Q16589	344 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PLEKHA7	Q6IQ23	1121 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	LRRC8E	Q6NSJ5	796 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	FJX1	Q86VR8	437 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	DIS3L2	Q8IYB7	885 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	NEXN-AS1	Q8NBZ9	246 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	METTL6	Q8TCB7	284 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	NEUROG1	Q92886	237 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	EVI5L	Q96CN4	794 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ASAH2	Q9NR71	780 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	CISD1	Q9NZ45	108 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HAO1	Q9UJM8	370 aa		4.26	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ATXN2	Q99700	1313 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313		J3KR12	359 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	BCAT2	O15382	392 aa	Predicted RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HSPA12A	O43301	675 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	MBD4	O95243	580 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	FCGR1A	P12314	374 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HARS2	P49590	506 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	CCR9	P51686	369 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	OLIG2	Q13516	323 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	KRT24	Q2M2I5	525 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	DSTYK	Q6XUX3	929 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	NOXA1	Q86UR1	476 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ZC3HC1	Q86WB0	502 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TDRP	Q86YL5	185 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ADHFE1	Q8IWW8	467 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PPHLN1	Q8NEY8	458 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ETNPPL	Q8TBG4	499 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	FAM149B1	Q96BN6	582 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	MAP7D2	Q96T17	732 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	KRTAP2-2	Q9BYT5	123 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TM6SF1	Q9BZW5	370 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	USP44	Q9H0E7	712 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	CD93	Q9NPY3	652 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PCDHB16	Q9NRJ7	776 aa		4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	AAR2	Q9Y312	384 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TDRD9	Q8NDG6	1382 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-205	ENST00000548313	IGLV5-52	A0A0A0MRZ9	124 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313		A0A1W2PRG0	241 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	CPED1	A4D0V7	1026 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TMEM202	A6NGA9	273 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	EIF3CL	B5ME19	914 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313		F5H0A9	414 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SLC28A2	O43868	658 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SEC31A	O94979	1220 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TKT	P29401	623 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HNRNPH1	P31943	449 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	BSG	P35613	385 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PIGA	P37287	484 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	PEX5	P50542	639 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	RARS	P54136	660 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	DSCR9	P59020	149 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TST	Q16762	297 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	USP41	Q3LFD5	358 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	FAAH2	Q6GMR7	532 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	METTL2B	Q6P1Q9	378 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	LCTL	Q6UWM7	567 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	MTSS1L	Q765P7	747 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	WDR63	Q8IWG1	891 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SPATA3	Q8NHX4	192 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	HUS1B	Q8NHY5	278 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ERGIC1	Q969X5	290 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	MED30	Q96HR3	178 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	METTL2A	Q96IZ6	378 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SLC41A2	Q96JW4	573 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	SH3GL2	Q99962	352 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	FAM110A	Q9BQ89	295 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	STRA6	Q9BX79	667 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	DDX4	Q9NQI0	724 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	FBXO9	Q9UK97	447 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	INTS6	Q9UL03	887 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	ERVK-11	Q9UQG0	969 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	STON1	Q9Y6Q2	735 aa		4.24	□□□□□ -1.73
DEPDC4-205	ENST00000548313	TRIP12	Q14669	1992 aa	Predicted RBP	4.23	□□□□□ -1.73
DEPDC4-205	ENST00000548313		A0A087X0M5	115 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms