RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SLC22A17Q8WUG5 538 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 BHMTQ93088 406 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 RMDN1Q96DB5 314 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 SCYL1Q96KG9 808 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 EMILIN2Q9BXX0 1053 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 LRMDAQ9H2I8 198 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 ZNF510Q9Y2H8 683 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 PCDHGC4Q9Y5F7 938 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 LCHNA4D1U4 455 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 TMEM114B3SHH9 223 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 FCHO1O14526 889 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 CRTAMO95727 393 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 ELF3P78545 371 aaPredicted RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 TSNAXIP1Q2TAA8 658 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 HECTD2Q5U5R9 776 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 FAM91A1Q658Y4 838 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 NCEH1Q6PIU2 408 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 TTC7BQ86TV6 843 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 CPXM2Q8N436 756 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 SPATA6LQ8N4H0 392 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 DCAF4L2Q8NA75 395 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 TDRD5Q8NAT2 981 aaKnown RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 SREK1Q8WXA9 508 aaKnown RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 SLC7A6OSQ96CW6 309 aaPredicted RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 RAD9AQ99638 391 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 CORO1BQ9BR76 489 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 GATA5Q9BWX5 397 aaPredicted RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 NMUR2Q9GZQ4 415 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 IGSF5Q9NSI5 407 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 PNPOQ9NVS9 261 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 NLE1Q9NVX2 485 aaPredicted RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 SH3BP1Q9Y3L3 701 aa21.01■□□□□ 0.95
RITA1-201ENST00000548278 MTCL1Q9Y4B5 1905 aaKnown RBP21.01■□□□□ 0.95
RITA1-201ENST00000548278 CD3EAPO15446 510 aaKnown RBP21■□□□□ 0.95
RITA1-201ENST00000548278 CCL16O15467 120 aa21■□□□□ 0.95
RITA1-201ENST00000548278 GLP2RO95838 553 aa21■□□□□ 0.95
RITA1-201ENST00000548278 GLUD1P00367 558 aa21■□□□□ 0.95
RITA1-201ENST00000548278 MYL4P12829 197 aa21■□□□□ 0.95
RITA1-201ENST00000548278 PSMA3P25788 255 aa21■□□□□ 0.95
RITA1-201ENST00000548278 UBE2Q1Q7Z7E8 422 aa21■□□□□ 0.95
RITA1-201ENST00000548278 MFN1Q8IWA4 741 aa21■□□□□ 0.95
RITA1-201ENST00000548278 DDX51Q8N8A6 666 aaKnown RBP eCLIP21■□□□□ 0.95
RITA1-201ENST00000548278 MRPL43Q8N983 215 aaKnown RBP21■□□□□ 0.95
RITA1-201ENST00000548278 HEXDCQ8WVB3 486 aa21■□□□□ 0.95
RITA1-201ENST00000548278 CDKN2AIPNLQ96HQ2 116 aa21■□□□□ 0.95
RITA1-201ENST00000548278 TMEM237Q96Q45 408 aa21■□□□□ 0.95
RITA1-201ENST00000548278 SLC46A2Q9BY10 475 aa21■□□□□ 0.95
RITA1-201ENST00000548278 KLC4Q9NSK0 619 aa21■□□□□ 0.95
RITA1-201ENST00000548278 XPR1Q9UBH6 696 aa21■□□□□ 0.95
RITA1-201ENST00000548278 LZTS1Q9Y250 596 aa21■□□□□ 0.95
RITA1-201ENST00000548278 VWA7Q9Y334 891 aa21■□□□□ 0.95
RITA1-201ENST00000548278 BMPR1AP36894 532 aa21■□□□□ 0.95
RITA1-201ENST00000548278 TRAF2Q12933 501 aa21■□□□□ 0.95
RITA1-201ENST00000548278 SEMA3AQ14563 771 aa21■□□□□ 0.95
RITA1-201ENST00000548278 KRT72Q14CN4 511 aa21■□□□□ 0.95
RITA1-201ENST00000548278 TAF1AQ15573 450 aaPredicted RBP21■□□□□ 0.95
RITA1-201ENST00000548278 LIPMQ5VYY2 423 aa21■□□□□ 0.95
RITA1-201ENST00000548278 MAVSQ7Z434 540 aa21■□□□□ 0.95
RITA1-201ENST00000548278 LPCAT1Q8NF37 534 aa21■□□□□ 0.95
RITA1-201ENST00000548278 MDGA1Q8NFP4 955 aa21■□□□□ 0.95
RITA1-201ENST00000548278 OR4L1Q8NH43 312 aa21■□□□□ 0.95
RITA1-201ENST00000548278 DDI1Q8WTU0 396 aa21■□□□□ 0.95
RITA1-201ENST00000548278 INPP5DQ92835 1189 aa21■□□□□ 0.95
RITA1-201ENST00000548278 TSPAN17Q96FV3 270 aa21■□□□□ 0.95
RITA1-201ENST00000548278 GCNAQ96QF7 691 aa21■□□□□ 0.95
RITA1-201ENST00000548278 SMIM14Q96QK8 99 aa21■□□□□ 0.95
RITA1-201ENST00000548278 EBF4Q9BQW3 602 aa21■□□□□ 0.95
RITA1-201ENST00000548278 ASAH2Q9NR71 780 aa21■□□□□ 0.95
RITA1-201ENST00000548278 ARL8BQ9NVJ2 186 aa21■□□□□ 0.95
RITA1-201ENST00000548278 ALPK3Q96L96 1907 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 TRAFD1O14545 582 aaPredicted RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 CSPG5O95196 566 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 WISP3O95389 354 aaPredicted RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 ATP5BP06576 529 aaKnown RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 KRT16P08779 473 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 ALOX15P16050 662 aaPredicted RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 PFKLP17858 780 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 PRKAA2P54646 552 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 MPP7Q5T2T1 576 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 PLPP4Q5VZY2 271 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 MRNIPQ6NTE8 343 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 GLT6D1Q7Z4J2 308 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 APCDD1Q8J025 514 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 PTCD3Q96EY7 689 aaKnown RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 MRPL57Q9BQC6 102 aaKnown RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 PRKAG2Q9UGJ0 569 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 LNPEPQ9UIQ6 1025 aa20.99■□□□□ 0.95
RITA1-201ENST00000548278 FCF1Q9Y324 198 aaKnown RBP20.99■□□□□ 0.95
RITA1-201ENST00000548278 LEFTY2O00292 366 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 ZNF195O14628 629 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 MT-CO1P00395 513 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 CTNNB1P35222 781 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 CCR2P41597 374 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 RHOAP61586 193 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 SPNS2Q8IVW8 549 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 TTC8Q8TAM2 541 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 TUBB6Q9BUF5 446 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 ADGRE3Q9BY15 652 aa20.98■□□□□ 0.95
RITA1-201ENST00000548278 UNKQ9C0B0 810 aaKnown RBP20.98■□□□□ 0.95
RITA1-201ENST00000548278 MRPL46Q9H2W6 279 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms