RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 IGLV5-37A0A075B6J1 123 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 GOLGA6L10A0A0M3HER8 536 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 CPED1A4D0V7 1026 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TNPO2O14787 897 aaKnown RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 BCAT2O15382 392 aaPredicted RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 TPD52L2O43399 206 aaKnown RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 ZIC3O60481 467 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 HEXAP06865 529 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 UMODP07911 640 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 POU1F1P28069 291 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 GPD2P43304 727 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 CCT5P48643 541 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TUBP50607 506 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 GAS1P54826 345 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 UFM1P61960 85 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TLE2Q04725 743 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 VEPH1Q14D04 833 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TAF11Q15544 211 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 MMEL1Q495T6 779 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 ANKRD54Q6NXT1 300 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 SPSB3Q6PJ21 355 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 FBXO46Q6PJ61 603 aaPredicted RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 ZC3HC1Q86WB0 502 aaKnown RBP2.35□□□□□ -2.03
CEP290-204ENST00000547926 TDRPQ86YL5 185 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 TMTC1Q8IUR5 882 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 SLC35F3Q8IY50 421 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 APOPT1Q96IL0 206 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 LRFN5Q96NI6 719 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 FUZQ9BT04 418 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 CDC14AQ9UNH5 594 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 CARD8Q9Y2G2 431 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 SNX9Q9Y5X1 595 aa2.35□□□□□ -2.03
CEP290-204ENST00000547926 HOXC11O43248 304 aaPredicted RBP2.34□□□□□ -2.03
CEP290-204ENST00000547926 NDUFS7O75251 213 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 GUCY1B2O75343 617 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 KDM4BO94953 1096 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 IGHV4-30-4P0DP06 118 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 PCNAP12004 261 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 ETFAP13804 333 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 EIF2S3P41091 472 aaKnown RBP2.34□□□□□ -2.03
CEP290-204ENST00000547926 DLG1Q12959 904 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 ITGADQ13349 1161 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 SNTA1Q13424 505 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 TRPC3Q13507 836 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 KIF19Q2TAC6 998 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 SLC9C2Q5TAH2 1124 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 KLHL24Q6TFL4 600 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 ZNF354CQ86Y25 554 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 CPXCR1Q8N123 301 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 RND1Q92730 232 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 HTRA1Q92743 480 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 USP13Q92995 863 aaPredicted RBP2.34□□□□□ -2.03
CEP290-204ENST00000547926 HVCN1Q96D96 273 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 BBS4Q96RK4 519 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 SIN3AQ96ST3 1273 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 RETREG1Q9H6L5 497 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 SMYD2Q9NRG4 433 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.34□□□□□ -2.03
CEP290-204ENST00000547926 LSM4Q9Y4Z0 139 aaKnown RBP2.34□□□□□ -2.03
CEP290-204ENST00000547926 NFS1Q9Y697 457 aa2.34□□□□□ -2.03
CEP290-204ENST00000547926 LOC102724159A0A0B4J2E5 919 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 GAGE10A6NGK3 116 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SNAP23O00161 211 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 WNT9BO14905 357 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 LDLRAD4O15165 306 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 CLDN14O95500 239 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 IFIT1P09914 478 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 G6PDP11413 515 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 AGAP20933 346 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 HNRNPH1P31943 449 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 RPP30P78346 268 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 ILF3Q12906 894 aaKnown RBP eCLIP2.33□□□□□ -2.04
CEP290-204ENST00000547926 PWP2Q15269 919 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 GPR68Q15743 365 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SLC9B1Q4ZJI4 515 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SGO1Q5FBB7 561 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 MTSS1LQ765P7 747 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 HEATR4Q86WZ0 1026 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 CREB3L4Q8TEY5 395 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 PABPC5Q96DU9 382 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 IGSF21Q96ID5 467 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 KLHL15Q96M94 604 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 PKP4Q99569 1192 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 HAUS8Q9BT25 410 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 TKTL2Q9H0I9 626 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 KCNN2Q9H2S1 579 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 MAGEE1Q9HCI5 957 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 HCN3Q9P1Z3 774 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SAA2-SAA4A0A096LPE2 208 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 TEX13CA0A0J9YWL9 993 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SOCS6O14544 535 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SLC16A5O15375 505 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 NDUFB4O95168 129 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 CYC1P08574 325 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 SNRNP70P08621 437 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 SHMT1P34896 483 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 CAMK1Q14012 370 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 PPP2R5BQ15173 497 aa2.33□□□□□ -2.04
CEP290-204ENST00000547926 RNPS1Q15287 305 aaKnown RBP2.33□□□□□ -2.04
CEP290-204ENST00000547926 C2orf68Q2NKX9 166 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms