RNA–Protein interactions for RNA: ENST00000547842.1

DDX23-205, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-205	ENST00000547842	SKIDA1	Q1XH10	827 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	MAP9	Q49MG5	647 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	EFHC2	Q5JST6	749 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	TAF3	Q5VWG9	929 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	SPECC1L	Q69YQ0	1117 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	DPY19L2P1	Q6NXN4	242 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	ERAP2	Q6P179	960 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	GPBAR1	Q8TDU6	330 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	RXFP2	Q8WXD0	754 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	FUBP1	Q96AE4	644 aa	Known RBP	13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	ZNF641	Q96N77	438 aa	Predicted RBP	13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	NCAPG	Q9BPX3	1015 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	KLC2	Q9H0B6	622 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	CDH19	Q9H159	772 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	EPN3	Q9H201	632 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	FGF22	Q9HCT0	170 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	MRPL40	Q9NQ50	206 aa	Known RBP	13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	METTL5	Q9NRN9	209 aa	Known RBP	13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	PCDHGA3	Q9Y5H0	932 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	NBAS	A2RRP1	2371 aa		13.93	□□□□□ -0.18
DDX23-205	ENST00000547842	CLEC18A	A5D8T8	446 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842		B4DGG1	531 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	HGS	O14964	777 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	ZW10	O43264	779 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	FGF3	P11487	239 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CR2	P20023	1033 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	KEL	P23276	732 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	ALDH4A1	P30038	563 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	SDC4	P31431	198 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	TRIM23	P36406	574 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CASR	P41180	1078 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CCR10	P46092	362 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	MTIF2	P46199	727 aa	Known RBP	13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	ARSD	P51689	593 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	POLE2	P56282	527 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	OR1D5	P58170	312 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	NOMO3	P69849	1222 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	IGFBP7	Q16270	282 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	AMZ1	Q400G9	498 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	NAA35	Q5VZE5	725 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	BRAT1	Q6PJG6	821 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CLEC18B	Q6UXF7	455 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	STRADA	Q7RTN6	431 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	C17orf82	Q86X59	251 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	DNAAF5	Q86Y56	855 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	IL22RA1	Q8N6P7	574 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	RTL3	Q8N8U3	475 aa	Known RBP	13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CLEC18C	Q8NCF0	446 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CCL4L1	Q8NHW4	92 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CENPI	Q92674	756 aa	Predicted RBP	13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	CYP4F12	Q9HCS2	524 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	LHX3	Q9UBR4	397 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	ANAPC2	Q9UJX6	822 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	LRP4	O75096	1905 aa		13.92	□□□□□ -0.18
DDX23-205	ENST00000547842	LRRK1	Q38SD2	2015 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	IGHV5-10-1	A0A0J9YXX1	117 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	C2CD4B	A6NLJ0	364 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	RASA4B	C9J798	803 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	RASA4	O43374	803 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	BUB1B	O60566	1050 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	RECQL5	O94762	991 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	MME	P08473	750 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	CD1C	P29017	333 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	UGT1A3	P35503	534 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	MMP12	P39900	470 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	STAT1	P42224	750 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	PTPN9	P43378	593 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	SERINC3	Q13530	473 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	RAPGEF1	Q13905	1077 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	NR1D2	Q14995	579 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	CFAP58	Q5T655	872 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	ZNF438	Q7Z4V0	828 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	NOP9	Q86U38	636 aa	Known RBP	13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	CCDC185	Q8N715	623 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	KIAA1524	Q8TCG1	905 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	GPT2	Q8TD30	523 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	NTAN1	Q96AB6	310 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	EXOC2	Q96KP1	924 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	CATSPER2	Q96P56	530 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	NUDT22	Q9BRQ3	303 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	ATP8A1	Q9Y2Q0	1164 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	RELN	P78509	3460 aa		13.91	□□□□□ -0.18
DDX23-205	ENST00000547842	SDK2	Q58EX2	2172 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	RHPN2P1	A8MT19	583 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	PDE2A	O00408	941 aa	Predicted RBP	13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	FGF1	P05230	155 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	LIF	P15018	202 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	MMP8	P22894	467 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	EPHB2	P29323	1055 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	GPR3	P46089	330 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	LIMK2	P53671	638 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	MAZ	P56270	477 aa	Known RBP	13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	HDAC4	P56524	1084 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	MAN2A1	Q16706	1144 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	TSR1	Q2NL82	804 aa	Known RBP	13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	PARP15	Q460N3	678 aa		13.9	□□□□□ -0.18
DDX23-205	ENST00000547842	KLHDC7A	Q5VTJ3	777 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms