RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PIP4P1Q86T03 277 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 EPHX4Q8IUS5 362 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 BRSK2Q8IWQ3 736 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 GHDCQ8N2G8 530 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 SETD6Q8TBK2 473 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 GTF3C6Q969F1 213 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 FAM162AQ96A26 154 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 MARK4Q96L34 752 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 WDFY2Q96P53 400 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 CLSTN3Q9BQT9 956 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 THUMPD3Q9BV44 507 aaKnown RBP4.42□□□□□ -1.7
SCAF11-210ENST00000547654 STRA6Q9BX79 667 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 SEZ6LQ9BYH1 1024 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 POLR1BQ9H9Y6 1135 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 SCPEP1Q9HB40 452 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 LTB4R2Q9NPC1 389 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 C20orf141Q9NUB4 165 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 C5AR2Q9P296 337 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 ODF2LQ9ULJ1 636 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 VPS4AQ9UN37 437 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 PTRH2Q9Y3E5 179 aaKnown RBP4.42□□□□□ -1.7
SCAF11-210ENST00000547654 CAPN7Q9Y6W3 813 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 SNAPC4Q5SXM2 1469 aa4.42□□□□□ -1.7
SCAF11-210ENST00000547654 MAPKBP1O60336 1514 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 CDRT15L2A8MXV6 281 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 BTBD18B2RXH4 712 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 UBE2Q2LH0YL09 131 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 SNAP23O00161 211 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 DSCR3O14972 297 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 STRNO43815 780 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 EXOC3O60645 756 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 GOSR1O95249 250 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 TMEM191BP0C7N4 346 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 TMIGD3P0DMS9 266 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 FDPSP14324 419 aaKnown RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 ARSAP15289 507 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 PRPH2P23942 346 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 AVPR2P30518 371 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 KRT2P35908 639 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 MTNR1AP48039 350 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 B4GALNT1Q00973 533 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 CEBPZQ03701 1054 aaKnown RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 DEUP1Q05D60 604 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 CCDC15Q0P6D6 951 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 SLMAPQ14BN4 828 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 PCLAFQ15004 111 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 SLC18A3Q16572 532 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 C15orf59Q2T9L4 293 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 ZSCAN23Q3MJ62 389 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 ATG9BQ674R7 924 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 MTFR2Q6P444 385 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 TSSK4Q6SA08 328 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 PTCHD4Q6ZW05 846 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 RTL10Q7L3V2 364 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 PLPPR4Q7Z2D5 763 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 TADA2BQ86TJ2 420 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 CPXM2Q8N436 756 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 Q8NFD4 153 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 C16orf52Q8NHV5 167 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 MRPS27Q92552 414 aaKnown RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 HSPH1Q92598 858 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 CIPCQ9C0C6 399 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 COPS7BQ9H9Q2 264 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-210ENST00000547654 TRPV4Q9HBA0 871 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 SNX15Q9NRS6 342 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 HSPB7Q9UBY9 170 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 POMT1Q9Y6A1 747 aa4.41□□□□□ -1.7
SCAF11-210ENST00000547654 GPRASP1Q5JY77 1395 aa4.4□□□□□ -1.7
SCAF11-210ENST00000547654 TRBC2A0A5B9 178 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 ARHGEF37A1IGU5 675 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 C19orf81C9J6K1 198 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 NDUFS3O75489 264 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 DLDP09622 509 aaKnown RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 IRF1P10914 325 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 PKMP14618 531 aaKnown RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 GABRB1P18505 474 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 TLX1P31314 330 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 GJC1P36383 396 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 BPIFB3P59826 476 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 AP1B1Q10567 949 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 DNASE1L3Q13609 305 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 E2F5Q15329 346 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 RBMS2Q15434 407 aaKnown RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF805Q5CZA5 627 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF628Q5EBL2 1059 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 SLC39A5Q6ZMH5 540 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 ZNF813Q6ZN06 617 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 MEPCEQ7L2J0 689 aaKnown RBP4.4□□□□□ -1.71
SCAF11-210ENST00000547654 PNPLA1Q8N8W4 532 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 IL17RCQ8NAC3 791 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 MCUQ8NE86 351 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 DNAAF1Q8NEP3 725 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 MOSPD2Q8NHP6 518 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 KIF18AQ8NI77 898 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 DUSP19Q8WTR2 217 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 COQ8BQ96D53 544 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 DGAT2Q96PD7 388 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 MMS19Q96T76 1030 aa4.4□□□□□ -1.71
SCAF11-210ENST00000547654 ELOVL1Q9BW60 279 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms