RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PDK1Q15118 436 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 NOMO1Q15155 1222 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 HNRNPA1L2Q32P51 320 aaKnown RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 TMEM31Q5JXX7 168 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 EOGTQ5NDL2 527 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 NPNTQ6UXI9 565 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 LEKR1Q6ZMV7 388 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SYT13Q7L8C5 426 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 CACUL1Q86Y37 369 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 LRRC49Q8IUZ0 686 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SPEM1Q8N4L4 309 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SH2D3CQ8N5H7 860 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF366Q8N895 744 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ATP11CQ8NB49 1132 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 CASKIN2Q8WXE0 1202 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 P3H4Q92791 437 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF419Q96HQ0 510 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 C16orf45Q96MC5 204 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 QKIQ96PU8 341 aaKnown RBP eCLIP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 NAPGQ99747 312 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 C1QTNF1Q9BXJ1 281 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 TM6SF2Q9BZW4 377 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SSU72Q9NP77 194 aaKnown RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 PRMT8Q9NR22 394 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SPATA6Q9NWH7 488 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-211ENST00000546304 C2orf42Q9NWW7 574 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SNX12Q9UMY4 172 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 SLC8A2Q9UPR5 921 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 ACTL7AQ9Y615 435 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 STON1Q9Y6Q2 735 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 GPR179Q6PRD1 2367 aa6.43□□□□□ -1.38
PRKDC-211ENST00000546304 GON4LQ3T8J9 2241 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SDK1Q7Z5N4 2213 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 A0A1W2PQF6 199 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TCRBV7S2A1N4TA0A589 114 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TCRBV21S2A2A0A5A6 115 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CTAGE9A4FU28 777 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TTC34A8MYJ7 566 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 K7ERQ8 282 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 PGRMC1O00264 195 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SMAD6O43541 496 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CEP104O60308 925 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SYNCRIPO60506 623 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 MAFKO60675 156 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 PAPSS2O95340 614 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CD160O95971 181 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 PEX11BO96011 259 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 FGGP02679 453 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 VAV1P15498 845 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TCP1P17987 556 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ST13P50502 369 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 DGKEP52429 567 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 RHOAP61586 193 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ETF1P62495 437 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 OTUD4Q01804 1114 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SATB1Q01826 763 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF33AQ06730 810 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SLC20A2Q08357 652 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SLC10A2Q12908 348 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CAMK2GQ13555 558 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 RFTN1Q14699 578 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 PRKD1Q15139 912 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CRY1Q16526 586 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 INO80DQ53TQ3 878 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SDE2Q6IQ49 451 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TIGD7Q6NT04 549 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 KIAA1211LQ6NV74 962 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 BZW1Q7L1Q6 419 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ZC3H18Q86VM9 953 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ZSCAN30Q86W11 494 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SLC13A5Q86YT5 568 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CDKL3Q8IVW4 592 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CCDC13Q8IYE1 715 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 PCDH20Q8N6Y1 951 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 KCT2Q8NC54 265 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TSTD1Q8NFU3 115 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ACTL9Q8TC94 416 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 FRS2Q8WU20 508 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 NSMCE1Q8WV22 266 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 FATE1Q969F0 183 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ERLEC1Q96DZ1 483 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 EXOC2Q96KP1 924 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CCDC114Q96M63 670 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 GDAP1L1Q96MZ0 367 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF599Q96NL3 588 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 OSBPL9Q96SU4 736 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 LGMNQ99538 433 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 FAM118BQ9BPY3 351 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CINPQ9BW66 212 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 TNKS2Q9H2K2 1166 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 FBRSQ9HAH7 460 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CD248Q9HCU0 757 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 POLR3BQ9NW08 1133 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SAE1Q9UBE0 346 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 LHX3Q9UBR4 397 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 SLCO3A1Q9UIG8 710 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 R3HDM2Q9Y2K5 976 aaKnown RBP6.42□□□□□ -1.38
PRKDC-211ENST00000546304 CEP192Q8TEP8 1941 aa6.42□□□□□ -1.38
PRKDC-211ENST00000546304 BPTFQ12830 3046 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms