RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PSMA4P25789 261 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 HMOX2P30519 316 aa8.79□□□□□ -1
TDP1-204ENST00000545686 GRIA3P42263 894 aa8.79□□□□□ -1
TDP1-204ENST00000545686 MAGEA8P43361 318 aa8.79□□□□□ -1
TDP1-204ENST00000545686 SCNN1BP51168 640 aa8.79□□□□□ -1
TDP1-204ENST00000545686 MAP3K7CLP57077 242 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CSHL1Q14406 222 aa8.79□□□□□ -1
TDP1-204ENST00000545686 PPP1R3AQ16821 1122 aa8.79□□□□□ -1
TDP1-204ENST00000545686 Q3C1V9 767 aa8.79□□□□□ -1
TDP1-204ENST00000545686 GJC2Q5T442 439 aaPredicted RBP8.79□□□□□ -1
TDP1-204ENST00000545686 TTC33Q6PID6 262 aaPredicted RBP8.79□□□□□ -1
TDP1-204ENST00000545686 CLVS1Q8IUQ0 354 aaPredicted RBP8.79□□□□□ -1
TDP1-204ENST00000545686 MINDY1Q8N5J2 469 aa8.79□□□□□ -1
TDP1-204ENST00000545686 ATPAF2Q8N5M1 289 aa8.79□□□□□ -1
TDP1-204ENST00000545686 IPMKQ8NFU5 416 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CANT1Q8WVQ1 401 aa8.79□□□□□ -1
TDP1-204ENST00000545686 FICDQ9BVA6 458 aa8.79□□□□□ -1
TDP1-204ENST00000545686 YTHDF1Q9BYJ9 559 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 TKTL2Q9H0I9 626 aa8.79□□□□□ -1
TDP1-204ENST00000545686 GSTO2Q9H4Y5 243 aa8.79□□□□□ -1
TDP1-204ENST00000545686 ACTR3BQ9P1U1 418 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TRIM64BA6NI03 449 aa8.79□□□□□ -1
TDP1-204ENST00000545686 PLOD2O00469 737 aa8.79□□□□□ -1
TDP1-204ENST00000545686 DLGAP1O14490 977 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TNPO2O14787 897 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 HNRNPCP07910 306 aaKnown RBP eCLIP8.79□□□□□ -1
TDP1-204ENST00000545686 CKMT2P17540 419 aa8.79□□□□□ -1
TDP1-204ENST00000545686 IMPDH1P20839 514 aa8.79□□□□□ -1
TDP1-204ENST00000545686 GPX3P22352 226 aa8.79□□□□□ -1
TDP1-204ENST00000545686 KCNA5P22460 613 aa8.79□□□□□ -1
TDP1-204ENST00000545686 AKAP5P24588 427 aa8.79□□□□□ -1
TDP1-204ENST00000545686 FASP25445 335 aa8.79□□□□□ -1
TDP1-204ENST00000545686 DCKP27707 260 aa8.79□□□□□ -1
TDP1-204ENST00000545686 EPHX2P34913 555 aa8.79□□□□□ -1
TDP1-204ENST00000545686 LEPRP48357 1165 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 SOX4Q06945 474 aaPredicted RBP8.79□□□□□ -1
TDP1-204ENST00000545686 MERTKQ12866 999 aa8.79□□□□□ -1
TDP1-204ENST00000545686 SPIDRQ14159 915 aa8.79□□□□□ -1
TDP1-204ENST00000545686 ATP6AP1Q15904 470 aa8.79□□□□□ -1
TDP1-204ENST00000545686 SLC36A3Q495N2 470 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TBCELQ5QJ74 424 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TMTC4Q5T4D3 741 aa8.79□□□□□ -1
TDP1-204ENST00000545686 NEPROQ6NW34 567 aa8.79□□□□□ -1
TDP1-204ENST00000545686 DUS1LQ6P1R4 473 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 SPRED1Q7Z699 444 aa8.79□□□□□ -1
TDP1-204ENST00000545686 FAM35AQ86V20 835 aa8.79□□□□□ -1
TDP1-204ENST00000545686 EPHX4Q8IUS5 362 aa8.79□□□□□ -1
TDP1-204ENST00000545686 SPATA6LQ8N4H0 392 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CBR4Q8N4T8 237 aa8.79□□□□□ -1
TDP1-204ENST00000545686 SPATA22Q8NHS9 363 aa8.79□□□□□ -1
TDP1-204ENST00000545686 ABTB1Q969K4 478 aaPredicted RBP8.79□□□□□ -1
TDP1-204ENST00000545686 C12orf43Q96C57 262 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 C19orf60Q96EN9 201 aa8.79□□□□□ -1
TDP1-204ENST00000545686 SGF29Q96ES7 293 aa8.79□□□□□ -1
TDP1-204ENST00000545686 HSPBAP1Q96EW2 488 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CENPNQ96H22 339 aaPredicted RBP8.79□□□□□ -1
TDP1-204ENST00000545686 VPS50Q96JG6 964 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
TDP1-204ENST00000545686 UBXN10Q96LJ8 280 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TRIM62Q9BVG3 475 aa8.79□□□□□ -1
TDP1-204ENST00000545686 CHST12Q9NRB3 414 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TBC1D13Q9NVG8 400 aa8.79□□□□□ -1
TDP1-204ENST00000545686 TMEM9Q9P0T7 183 aa8.79□□□□□ -1
TDP1-204ENST00000545686 NEU3Q9UQ49 428 aa8.79□□□□□ -1
TDP1-204ENST00000545686 FIS1Q9Y3D6 152 aa8.79□□□□□ -1
TDP1-204ENST00000545686 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
TDP1-204ENST00000545686 NME4O00746 187 aa8.78□□□□□ -1
TDP1-204ENST00000545686 MATN3O15232 486 aa8.78□□□□□ -1
TDP1-204ENST00000545686 FGF10O15520 208 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 RASAL1O95294 804 aa8.78□□□□□ -1
TDP1-204ENST00000545686 WISP3O95389 354 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 MATN4O95460 622 aa8.78□□□□□ -1
TDP1-204ENST00000545686 MT-CYBP00156 380 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 NELFEP18615 380 aaKnown RBP8.78□□□□□ -1
TDP1-204ENST00000545686 HDCP19113 662 aa8.78□□□□□ -1
TDP1-204ENST00000545686 HOXC13P31276 330 aa8.78□□□□□ -1
TDP1-204ENST00000545686 CCT8P50990 548 aa8.78□□□□□ -1
TDP1-204ENST00000545686 PLOD1Q02809 727 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 TIGD7Q6NT04 549 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 CYHR1Q6ZMK1 362 aa8.78□□□□□ -1
TDP1-204ENST00000545686 BHLHA9Q7RTU4 235 aa8.78□□□□□ -1
TDP1-204ENST00000545686 FUNDC1Q8IVP5 155 aa8.78□□□□□ -1
TDP1-204ENST00000545686 ANKRD13AQ8IZ07 590 aa8.78□□□□□ -1
TDP1-204ENST00000545686 ZNF786Q8N393 782 aa8.78□□□□□ -1
TDP1-204ENST00000545686 PNPT1Q8TCS8 783 aaKnown RBP8.78□□□□□ -1
TDP1-204ENST00000545686 GRIN3AQ8TCU5 1115 aa8.78□□□□□ -1
TDP1-204ENST00000545686 BORCS5Q969J3 196 aa8.78□□□□□ -1
TDP1-204ENST00000545686 MYRFLQ96LU7 910 aa8.78□□□□□ -1
TDP1-204ENST00000545686 FSD1LQ9BXM9 530 aa8.78□□□□□ -1
TDP1-204ENST00000545686 LIN28AQ9H9Z2 209 aaKnown RBP8.78□□□□□ -1
TDP1-204ENST00000545686 CYP4F12Q9HCS2 524 aa8.78□□□□□ -1
TDP1-204ENST00000545686 PALMDQ9NP74 551 aa8.78□□□□□ -1
TDP1-204ENST00000545686 TNFRSF12AQ9NP84 129 aa8.78□□□□□ -1
TDP1-204ENST00000545686 TBC1D23Q9NUY8 699 aa8.78□□□□□ -1
TDP1-204ENST00000545686 KCNH4Q9UQ05 1017 aa8.78□□□□□ -1
TDP1-204ENST00000545686 SH3GLB1Q9Y371 365 aa8.78□□□□□ -1
TDP1-204ENST00000545686 NLRC5Q86WI3 1866 aa8.78□□□□□ -1
TDP1-204ENST00000545686 A0A0J9YYE9 177 aa8.78□□□□□ -1
TDP1-204ENST00000545686 TTC24A2A3L6 582 aaPredicted RBP8.78□□□□□ -1
TDP1-204ENST00000545686 SNAP91O60641 907 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms