RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 TAF1AQ15573 450 aaPredicted RBP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 SKIDA1Q1XH10 827 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 KIAA0930Q6ICG6 404 aaPredicted RBP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 TRMT10BQ6PF06 316 aaKnown RBP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 TAOK1Q7L7X3 1001 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 KCNMB4Q86W47 210 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 LRRC6Q86X45 466 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 TDRPQ86YL5 185 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 CHPFQ8IZ52 775 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 STK40Q8N2I9 435 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 ZNF513Q8N8E2 541 aaPredicted RBP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 STYXQ8WUJ0 223 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 PIH1D2Q8WWB5 315 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 PEX13Q92968 403 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 MRRFQ96E11 262 aaKnown RBP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 KLHL32Q96NJ5 620 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 FCRL3Q96P31 734 aaPredicted RBP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 PAFAH2Q99487 392 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 MTG2Q9H4K7 406 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 MAGEE1Q9HCI5 957 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 SLC2A4RGQ9NR83 387 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 TREX1Q9NSU2 369 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 MOCS1Q9NZB8 636 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 ZFATQ9P243 1243 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCARB1-209ENST00000545305 TXNDC16Q9P2K2 825 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 ZNF711Q9Y462 761 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 SPO11Q9Y5K1 396 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 ARL5AQ9Y689 179 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 WASF2Q9Y6W5 498 aa13.84□□□□□ -0.19
SCARB1-209ENST00000545305 A0A0J9YYE9 177 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 CAPN8A6NHC0 703 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 C1QTNF3-AMACRE9PGA6 284 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 LDB2O43679 373 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 NARSO43776 548 aaKnown RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 SIN3BO75182 1162 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 TRBC1P01850 177 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 CTPS1P17812 591 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 LPOP22079 712 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 SLC8A1P32418 973 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 PRAMEP78395 509 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 TFF2Q03403 129 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 THOC5Q13769 683 aaKnown RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 TMED2Q15363 201 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 C9orf64Q5T6V5 341 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 SDE2Q6IQ49 451 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 ESRP1Q6NXG1 681 aaKnown RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 TXNDC11Q6PKC3 985 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 MARK2Q7KZI7 788 aaKnown RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 TRMT11Q7Z4G4 463 aaKnown RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 SLC26A11Q86WA9 606 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 CNPY4Q8N129 248 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 HCAR2Q8TDS4 363 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 PGM2Q96G03 612 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 PPP1R16AQ96I34 528 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 ZNF778Q96MU6 729 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 FAM167BQ9BTA0 163 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 GPR63Q9BZJ6 419 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 FBRSL1Q9HCM7 1045 aaKnown RBP13.83□□□□□ -0.2
SCARB1-209ENST00000545305 NSMCE4AQ9NXX6 385 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 CACNA2D2Q9NY47 1150 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 SLC2A6Q9UGQ3 507 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 LGALS13Q9UHV8 139 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 STON1Q9Y6Q2 735 aa13.83□□□□□ -0.2
SCARB1-209ENST00000545305 TSPAN11A1L157 253 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 HMGB1P1B2RPK0 211 aaPredicted RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 K7EQS6 105 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 STX7O15400 261 aaKnown RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 SYNCRIPO60506 623 aaKnown RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 RPP40O75818 363 aaKnown RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 VAPBO95292 243 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 SYF2O95926 243 aaKnown RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 EGFP01133 1207 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 ALPIP09923 528 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 ERVK-10P10266 1014 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 CYP2A6P11509 494 aaPredicted RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 TIE1P35590 1138 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 SERPINB9P50453 376 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 ZNF140P52738 457 aaPredicted RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 STARD3Q14849 445 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 RASA2Q15283 850 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 SMAD1Q15797 465 aaKnown RBP13.82□□□□□ -0.2
SCARB1-209ENST00000545305 CNGA3Q16281 694 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 TMEM196Q5HYL7 178 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 LGSNQ5TDP6 509 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 FSTL4Q6MZW2 842 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 TPRG1Q6ZUI0 275 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 ADHFE1Q8IWW8 467 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 UNC5BQ8IZJ1 945 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 OTUD6BQ8N6M0 293 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 TMIEQ8NEW7 156 aa13.82□□□□□ -0.2
SCARB1-209ENST00000545305 CALML6Q8TD86 181 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms