RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ODC1P11926 461 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 ZNF28P17035 718 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 CNTFP26441 200 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 GABRB3P28472 473 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 POLE2P56282 527 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 LILRA4P59901 499 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 MRPS21P82921 87 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 GFPT1Q06210 699 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 SLC14A1Q13336 389 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 TRIM29Q14134 588 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 SLC29A2Q14542 456 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 USP10Q14694 798 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 DUOXA1Q1HG43 343 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 ZMAT1Q5H9K5 638 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 PRR31Q5SQ13 230 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 KLHL17Q6TDP4 642 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 USP30Q70CQ3 517 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 GATAD2AQ86YP4 633 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 DCP1BQ8IZD4 617 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 CMTM4Q8IZR5 234 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 CHCHD4Q8N4Q1 142 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 SLC30A5Q8TAD4 765 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 OLIG1Q8TAK6 271 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 ATP2A3Q93084 1043 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 ZBTB45Q96K62 511 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 RPL10LQ96L21 214 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 SENP8Q96LD8 212 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 PRPF18Q99633 342 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 SEPT5Q99719 369 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 PYM1Q9BRP8 204 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 NDC1Q9BTX1 674 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 TIPINQ9BVW5 301 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 MS4A7Q9GZW8 240 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 SIK2Q9H0K1 926 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 DUS2Q9NX74 493 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 UXTQ9UBK9 157 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 KLK13Q9UKR3 277 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 PMF1-BGLAPU3KQ54 211 aa6.41□□□□□ -1.38
CPSF7-222ENST00000544585 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
CPSF7-222ENST00000544585 TRIP11Q15643 1979 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 CEP295Q9C0D2 2601 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TEX51A0A1B0GUA7 166 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 MYOCOSA0A1B0GUC4 107 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 MYMKA6NI61 221 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 CXorf49A8MYA2 514 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 H0YCG3 227 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 M0QYG6 137 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 RAB27BO00194 218 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SNX2O60749 519 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 HAUS5O94927 633 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ADRB2P07550 413 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ITGA2BP08514 1039 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SERPINF2P08697 491 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 FDPSP14324 419 aaKnown RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ARSAP15289 507 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ENGP17813 658 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SCP2P22307 547 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 MCM7P33993 719 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 CCT6AP40227 531 aaKnown RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 P2RY2P41231 377 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 MATR3P43243 847 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 IFNAR2P48551 515 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ZNF135P52742 658 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SCAPQ12770 1279 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 MTF1Q14872 753 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ANKRD1Q15327 319 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SLC39A12Q504Y0 691 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SPATA1Q5VX52 437 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TXNDC8Q6A555 127 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ANO7Q6IWH7 933 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 C19orf48Q6RUI8 117 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 USP49Q70CQ1 688 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 MOGAT3Q86VF5 341 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 CCDC117Q8IWD4 279 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 DIS3L2Q8IYB7 885 aaKnown RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 FSIP1Q8NA03 581 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 OR14K1Q8NGZ2 314 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 STT3BQ8TCJ2 826 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 EID2BQ96D98 161 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 AJUBAQ96IF1 538 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 PPP1R9BQ96SB3 815 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 RAB34Q9BZG1 259 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TPSD1Q9BZJ3 242 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 ZCWPW1Q9H0M4 648 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TMEM168Q9H0V1 697 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TMEM206Q9H813 350 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 RPF1Q9H9Y2 349 aaKnown RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 BARX1Q9HBU1 254 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 GPR35Q9HC97 309 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SAYSD1Q9NPB0 183 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 RASSF1Q9NS23 344 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TMEM74BQ9NUR3 256 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 BCCIPQ9P287 314 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPSF7-222ENST00000544585 XPR1Q9UBH6 696 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 LRWD1Q9UFC0 647 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 TUBGCP4Q9UGJ1 667 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 SLC13A4Q9UKG4 626 aa6.4□□□□□ -1.38
CPSF7-222ENST00000544585 PILRBQ9UKJ0 227 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms