RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CD160O95971 181 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CPP00450 1065 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TNFP01375 233 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CSF2P04141 144 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PRB1P04280 392 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 GP1BAP07359 652 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 ANXA6P08133 673 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 HOXC4P09017 264 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 GOLGA6DP0CG33 693 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CCNB1P14635 433 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 JUPP14923 745 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PRLRP16471 622 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 JUNDP17535 347 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 AMPD1P23109 780 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 DGKAP23743 735 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 KDELR1P24390 212 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 GSDMDP57764 484 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TAS2R38P59533 333 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC25A11Q02978 314 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 KIF5AQ12840 1032 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PDE1CQ14123 709 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 DPYSL3Q14195 570 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 NUMA1Q14980 2115 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 ACOX1Q15067 660 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PAFAH1B3Q15102 231 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 AGERQ15109 404 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TCEAL1Q15170 157 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CYTH1Q15438 398 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 ASTE1Q2TB18 679 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 RAB6CQ53S08 254 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TFDP3Q5H9I0 405 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 E4F1Q66K89 784 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 LEKR1Q6ZMV7 388 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 MACC1Q6ZN28 852 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 DAAM2Q86T65 1068 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 KIAA1328Q86T90 577 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 RFX6Q8HWS3 928 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CAMK1DQ8IU85 385 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC50Q8IVM0 306 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 ARFGAP1Q8N6T3 406 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PDCD7Q8N8D1 485 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 AVL9Q8NBF6 648 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TSEN2Q8NCE0 465 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 FAM71BQ8TC56 605 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 KIAA1524Q8TCG1 905 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 P3H4Q92791 437 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 NAT6Q93015 286 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TSGA13Q96PP4 275 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 UBL7Q96S82 380 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PEBP4Q96S96 227 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 MGME1Q9BQP7 344 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 WRAP53Q9BUR4 548 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 RAB6CQ9H0N0 254 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 NOL6Q9H6R4 1146 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PCDH12Q9NPG4 1184 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PHPT1Q9NRX4 125 aaPredicted RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 RBM22Q9NW64 420 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 GOLGA6AQ9NYA3 693 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 KLQ9UEF7 1012 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 KLK13Q9UKR3 277 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 NEU3Q9UQ49 428 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 PCDHA13Q9Y5I0 950 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 ANKRD17O75179 2603 aaKnown RBP5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 TEX15Q9BXT5 2789 aa5.64□□□□□ -1.51
CLSTN3-215ENST00000544584 COL12A1Q99715 3063 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 MYO9AB2RTY4 2548 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SPAARA0A1B0GVQ0 90 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC66A2RUB6 948 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 RGSL1A5PLK6 1076 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 HACD1B0YJ81 288 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 J3QKU1 62 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 PLK4O00444 970 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 WNT9AO14904 365 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 HTRA2O43464 458 aaPredicted RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 KRT86O43790 486 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 MAFKO60675 156 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CBFA2T3O75081 653 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 RASGRP1O95267 797 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 PIGNO95427 931 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 KRT1P04264 644 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 C6P13671 934 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC2A4P14672 509 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 NME1P15531 152 aaKnown RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 TIMP2P16035 220 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 TSHRP16473 764 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 TGM2P21980 687 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 IL1R2P27930 398 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 CDC25BP30305 580 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 VIPR1P32241 457 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ACTN2P35609 894 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 MMP12P39900 470 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 LIG3P49916 1009 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 ZNF75DP51815 510 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 METAP1P53582 386 aa5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 HADHBP55084 474 aaKnown RBP5.63□□□□□ -1.51
CLSTN3-215ENST00000544584 GALNT2Q10471 571 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms